RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TEX22C9J3V5 150 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 SPART-AS1P0CW21 52 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 SETD2Q9BYW2 2564 aaPredicted RBP6.89□□□□□ -1.31
NIPBL-201ENST00000282516 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 RNF183Q96D59 192 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 A0A0G2JRQ6 117 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 UNQ6494/PRO21346Q6UXR6 183 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 V9GYY9 64 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 TMEM105Q8N8V8 129 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 NUP210LQ5VU65 1888 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 FAM240AA0A1B0GVK7 77 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 WIPF3A6NGB9 483 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 NCR3O14931 201 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 H3BT86 120 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 C9orf66Q5T8R8 295 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 MLANAQ16655 118 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 PCNX3Q9H6A9 2034 aa6.88□□□□□ -1.31
NIPBL-201ENST00000282516 C10orf91Q5T1B1 145 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 WDR86Q86TI4 376 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
NIPBL-201ENST00000282516 CD59P13987 128 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 LMO1P25800 156 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 ZNF747Q9BV97 191 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 LINC00205P59089 165 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 ATG2AQ2TAZ0 1938 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 COX7BP24311 80 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 Q0VFX4 171 aa6.87□□□□□ -1.31
NIPBL-201ENST00000282516 A4D1N5 150 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGHV2-5P01817 119 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 Q8N1Y9 231 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 FGF23Q9GZV9 251 aaPredicted RBP6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGHV4OR15-8A0A075B7B6 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 A0A087WW49 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 CCL24O00175 119 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGKV1-6A0A0C4DH72 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 LECT2O14960 151 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
NIPBL-201ENST00000282516 NOTCH4Q99466 2003 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGHV3-30P01768 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGHV3-33P01772 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGHV3-30-3P0DP02 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 IGHV3-30-5P0DP03 117 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 HOXB4P17483 251 aaPredicted RBP6.86□□□□□ -1.31
NIPBL-201ENST00000282516 B3GALT5-AS1P59052 145 aa6.86□□□□□ -1.31
NIPBL-201ENST00000282516 Q6ZS92 163 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 TANC1Q9C0D5 1861 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 BPY2O14599 106 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 C5orf24Q7Z6I8 188 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 KLK5Q9Y337 293 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-201ENST00000282516 GNRH2O43555 120 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 NAV2Q8IVL1 2488 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 ALPK3Q96L96 1907 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 FAM236DA0A1B0GTK5 79 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 FAM236CP0DP71 79 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 RPL39LQ96EH5 51 aaKnown RBP6.85□□□□□ -1.31
NIPBL-201ENST00000282516 LOXP28300 417 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-201ENST00000282516 SP5Q6BEB4 398 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-201ENST00000282516 MAPK1IP1LQ8NDC0 245 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 ZNF581Q9P0T4 197 aa6.85□□□□□ -1.31
NIPBL-201ENST00000282516 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
NIPBL-201ENST00000282516 Q6ZUT4 128 aa6.84□□□□□ -1.31
NIPBL-201ENST00000282516 ZNRD1Q9P1U0 126 aa6.84□□□□□ -1.31
NIPBL-201ENST00000282516 GP9P14770 177 aa6.84□□□□□ -1.31
NIPBL-201ENST00000282516 EXPH5Q8NEV8 1989 aa6.84□□□□□ -1.32
NIPBL-201ENST00000282516 SPAG11BQ08648 103 aa6.84□□□□□ -1.32
NIPBL-201ENST00000282516 FOXI1Q12951 378 aa6.84□□□□□ -1.32
NIPBL-201ENST00000282516 PIFOQ8TCI5 191 aa6.84□□□□□ -1.32
NIPBL-201ENST00000282516 C17orf77Q96MU5 243 aa6.84□□□□□ -1.32
NIPBL-201ENST00000282516 FN1P02751 2386 aaKnown RBP6.83□□□□□ -1.32
NIPBL-201ENST00000282516 ZNF726P1Q15940 193 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 DAND5Q8N907 189 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 IGLV2-23P01705 113 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 TLN1Q9Y490 2541 aaKnown RBP6.83□□□□□ -1.32
NIPBL-201ENST00000282516 K7EN84 100 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 VWCEQ96DN2 955 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-201ENST00000282516 LINC00643Q86TS7 51 aa6.83□□□□□ -1.32
NIPBL-201ENST00000282516 CLEC2BQ92478 149 aa6.82□□□□□ -1.32
NIPBL-201ENST00000282516 TPSG1Q9NRR2 321 aa6.82□□□□□ -1.32
NIPBL-201ENST00000282516 PIEZO1Q92508 2521 aa6.82□□□□□ -1.32
NIPBL-201ENST00000282516 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
NIPBL-201ENST00000282516 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
NIPBL-201ENST00000282516 AGPAT4-IT1Q9H0P7 198 aa6.82□□□□□ -1.32
NIPBL-201ENST00000282516 C15orf65H3BRN8 121 aa6.81□□□□□ -1.32
NIPBL-201ENST00000282516 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
NIPBL-201ENST00000282516 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
NIPBL-201ENST00000282516 WI2-2373I1.2A0A1W2PRP0 233 aa6.81□□□□□ -1.32
NIPBL-201ENST00000282516 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
NIPBL-201ENST00000282516 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms