RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 TRGV11A0A075B6L2 103 aa13.19□□□□□ -0.3
TRPC1-201ENST00000273482 FOXI1Q12951 378 aa13.18□□□□□ -0.3
TRPC1-201ENST00000273482 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
TRPC1-201ENST00000273482 H3BMM0 161 aa13.18□□□□□ -0.3
TRPC1-201ENST00000273482 Q8N9W7 124 aa13.18□□□□□ -0.3
TRPC1-201ENST00000273482 UBE2WQ96B02 151 aa13.18□□□□□ -0.3
TRPC1-201ENST00000273482 ANKRD17O75179 2603 aaKnown RBP13.17□□□□□ -0.3
TRPC1-201ENST00000273482 RBAKDNA6NC62 111 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 B5MCH6 92 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 HIST2H2BCQ6DN03 193 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 LY6G5BQ8NDX9 201 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 BUB3O43684 328 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 GNRH2O43555 120 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 TEN1Q86WV5 123 aa13.17□□□□□ -0.3
TRPC1-201ENST00000273482 F6UB75 175 aa13.16□□□□□ -0.3
TRPC1-201ENST00000273482 PTH2Q96A98 100 aa13.16□□□□□ -0.3
TRPC1-201ENST00000273482 IGLV2-11P01706 119 aa13.16□□□□□ -0.3
TRPC1-201ENST00000273482 E9PLD3 99 aa13.15□□□□□ -0.3
TRPC1-201ENST00000273482 SIRPDQ9H106 197 aa13.15□□□□□ -0.3
TRPC1-201ENST00000273482 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
TRPC1-201ENST00000273482 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
TRPC1-201ENST00000273482 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
TRPC1-201ENST00000273482 CFC1BP0CG36 223 aa13.15□□□□□ -0.31
TRPC1-201ENST00000273482 CFC1P0CG37 223 aa13.15□□□□□ -0.31
TRPC1-201ENST00000273482 STHQ8IWL8 128 aa13.15□□□□□ -0.31
TRPC1-201ENST00000273482 FANCD2OSQ96PS1 177 aa13.15□□□□□ -0.31
TRPC1-201ENST00000273482 TM2D2Q9BX73 214 aa13.14□□□□□ -0.31
TRPC1-201ENST00000273482 J3QLI3 93 aa13.14□□□□□ -0.31
TRPC1-201ENST00000273482 IFITM1P13164 125 aa13.14□□□□□ -0.31
TRPC1-201ENST00000273482 ADARB2-AS1A8MUL3 147 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 IGLC6P0CF74 106 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE5Q13069 117 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE6Q13070 117 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 MORN3Q6PF18 240 aaPredicted RBP13.13□□□□□ -0.31
TRPC1-201ENST00000273482 NPBQ8NG41 125 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 SPANXB1Q9NS25 103 aaPredicted RBP13.13□□□□□ -0.31
TRPC1-201ENST00000273482 HECTD1Q9ULT8 2610 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 ZNF625Q96I27 306 aaPredicted RBP13.13□□□□□ -0.31
TRPC1-201ENST00000273482 TMEM101Q96IK0 257 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 SS18L2Q9UHA2 77 aa13.13□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE12JA6NER3 117 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE7O76087 117 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE12FP0CL80 117 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE12GP0CL81 117 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE12IP0CL82 117 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 GAGE4Q13068 117 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 TRAV12-1A0A0B4J245 112 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 ZNF843Q8N446 348 aa13.12□□□□□ -0.31
TRPC1-201ENST00000273482 LGALS1P09382 135 aaKnown RBP13.12□□□□□ -0.31
TRPC1-201ENST00000273482 MRPL53Q96EL3 112 aaKnown RBP13.12□□□□□ -0.31
TRPC1-201ENST00000273482 SPEGQ15772 3267 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 SPINK13Q1W4C9 94 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 NDUFA12Q9UI09 145 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 CRYBA4P53673 196 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 C15orf53Q8NAA6 179 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 KLK9Q9UKQ9 250 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 A4D1N5 150 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 DEFB131AP59861 70 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 C11orf71Q6IPW1 123 aa13.11□□□□□ -0.31
TRPC1-201ENST00000273482 LINC01548A6NM66 108 aa13.1□□□□□ -0.31
TRPC1-201ENST00000273482 MAPKAPK5-AS1Q8N8E1 139 aa13.1□□□□□ -0.31
TRPC1-201ENST00000273482 TRAV12-2A0A075B6T6 113 aa13.1□□□□□ -0.31
TRPC1-201ENST00000273482 PHLDA1Q8WV24 401 aaPredicted RBP13.1□□□□□ -0.31
TRPC1-201ENST00000273482 BAALCQ8WXS3 180 aa13.1□□□□□ -0.31
TRPC1-201ENST00000273482 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
TRPC1-201ENST00000273482 A0A1W2PPR1 153 aa13.1□□□□□ -0.31
TRPC1-201ENST00000273482 NDUFA4O00483 81 aa13.09□□□□□ -0.31
TRPC1-201ENST00000273482 I3L3M4 83 aa13.09□□□□□ -0.31
TRPC1-201ENST00000273482 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
TRPC1-201ENST00000273482 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
TRPC1-201ENST00000273482 C5orf56Q8N8D9 126 aa13.09□□□□□ -0.31
TRPC1-201ENST00000273482 UBE2E2Q96LR5 201 aa13.09□□□□□ -0.31
TRPC1-201ENST00000273482 FRYLO94915 3013 aa13.09□□□□□ -0.31
TRPC1-201ENST00000273482 ANKRD29Q8N6D5 301 aa13.08□□□□□ -0.32
TRPC1-201ENST00000273482 U3KQK5 164 aa13.08□□□□□ -0.32
TRPC1-201ENST00000273482 C11orf86A6NJI1 115 aa13.08□□□□□ -0.32
TRPC1-201ENST00000273482 TCTEX1D4Q5JR98 221 aa13.08□□□□□ -0.32
TRPC1-201ENST00000273482 RPL39P62891 51 aaKnown RBP13.08□□□□□ -0.32
TRPC1-201ENST00000273482 PRIMA1Q86XR5 153 aa13.07□□□□□ -0.32
TRPC1-201ENST00000273482 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
TRPC1-201ENST00000273482 TRGV2A0A075B6R0 118 aa13.07□□□□□ -0.32
TRPC1-201ENST00000273482 ZFP2Q6ZN57 461 aa13.07□□□□□ -0.32
TRPC1-201ENST00000273482 REV3LO60673 3130 aa13.07□□□□□ -0.32
TRPC1-201ENST00000273482 TNRC6BQ9UPQ9 1833 aaKnown RBP13.07□□□□□ -0.32
TRPC1-201ENST00000273482 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
TRPC1-201ENST00000273482 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
TRPC1-201ENST00000273482 PCSK5Q92824 1860 aa13.06□□□□□ -0.32
TRPC1-201ENST00000273482 TRAV13-1A0A0B4J241 112 aa13.06□□□□□ -0.32
TRPC1-201ENST00000273482 DEFB1P60022 68 aa13.06□□□□□ -0.32
TRPC1-201ENST00000273482 RPL35AP18077 110 aaKnown RBP13.06□□□□□ -0.32
TRPC1-201ENST00000273482 RNASE13Q5GAN3 156 aaKnown RBP13.06□□□□□ -0.32
TRPC1-201ENST00000273482 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
TRPC1-201ENST00000273482 CRYGBP07316 175 aa13.05□□□□□ -0.32
TRPC1-201ENST00000273482 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
TRPC1-201ENST00000273482 RNF185Q96GF1 192 aa13.05□□□□□ -0.32
TRPC1-201ENST00000273482 RASL10AQ92737 203 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms