RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
CTSD-201ENST00000236671 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
CTSD-201ENST00000236671 NXPH4O95158 308 aa11.68□□□□□ -0.54
CTSD-201ENST00000236671 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
CTSD-201ENST00000236671 POM121L12Q8N7R1 296 aa11.68□□□□□ -0.54
CTSD-201ENST00000236671 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
CTSD-201ENST00000236671 IGHV4-38-2P0DP08 117 aa11.67□□□□□ -0.54
CTSD-201ENST00000236671 ZNF479Q96JC4 524 aa11.67□□□□□ -0.54
CTSD-201ENST00000236671 IGKV3-7A0A075B6H7 116 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 Q96MF0 132 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 A0A1B0GWB2 263 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 LINC00315P59091 139 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 FOXI2Q6ZQN5 318 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 LCNL1Q6ZST4 164 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 KIF25-AS1Q9Y6Z4 181 aa11.66□□□□□ -0.54
CTSD-201ENST00000236671 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.544e-7■■□□□ 11.7
CTSD-201ENST00000236671 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 A6NDX4 124 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 PRSS29PA6NIE9 313 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 H3BUX3 64 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 PPP1R17O96001 155 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 PF4V1P10720 104 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 Q6ZS46 218 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 AGRNO00468 2067 aa11.65□□□□□ -0.54
CTSD-201ENST00000236671 ANK3Q12955 4377 aaKnown RBP11.65□□□□□ -0.54
CTSD-201ENST00000236671 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.55
CTSD-201ENST00000236671 PRADC1Q9BSG0 188 aa11.65□□□□□ -0.55
CTSD-201ENST00000236671 BEX4Q9NWD9 120 aaPredicted RBP11.65□□□□□ -0.55
CTSD-201ENST00000236671 KLLNB2CW77 178 aa11.64□□□□□ -0.55
CTSD-201ENST00000236671 BLCAPP62952 87 aa11.64□□□□□ -0.55
CTSD-201ENST00000236671 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
CTSD-201ENST00000236671 RRN3P1Q2M238 152 aa11.64□□□□□ -0.55
CTSD-201ENST00000236671 IGLV1-40P01703 118 aa11.63□□□□□ -0.55
CTSD-201ENST00000236671 PIMREGQ9BSJ6 248 aa11.63□□□□□ -0.55
CTSD-201ENST00000236671 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
CTSD-201ENST00000236671 DUSP14O95147 198 aaKnown RBP11.63□□□□□ -0.55
CTSD-201ENST00000236671 CRYGDP07320 174 aa11.63□□□□□ -0.55
CTSD-201ENST00000236671 EDN2P20800 178 aa11.63□□□□□ -0.55
CTSD-201ENST00000236671 C10orf105Q8TEF2 133 aa11.63□□□□□ -0.55
CTSD-201ENST00000236671 MUC4Q99102 2169 aa11.63□□□□□ -0.55
CTSD-201ENST00000236671 IGHV4OR15-8A0A075B7B6 117 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 A0A087WW49 117 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 RPL32P62910 135 aaKnown RBP11.62□□□□□ -0.55
CTSD-201ENST00000236671 CLEC2AQ6UVW9 174 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 NSD1Q96L73 2696 aaPredicted RBP11.62□□□□□ -0.55
CTSD-201ENST00000236671 F8W1H4 67 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 TSHBP01222 138 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 SRD5A1P18405 259 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 SMR3AQ99954 134 aa11.62□□□□□ -0.55
CTSD-201ENST00000236671 CFHR3Q02985 330 aa11.61□□□□□ -0.55
CTSD-201ENST00000236671 WFDC2Q14508 124 aa11.61□□□□□ -0.55
CTSD-201ENST00000236671 SPANXB1Q9NS25 103 aaPredicted RBP11.61□□□□□ -0.55
CTSD-201ENST00000236671 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 H3BMG7 143 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 DCANP1Q8TF63 244 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 JPT2Q9H910 190 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 NF1P21359 2839 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 SETD2Q9BYW2 2564 aaPredicted RBP11.6□□□□□ -0.55
CTSD-201ENST00000236671 IGIPA6NJ69 53 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
CTSD-201ENST00000236671 MORN3Q6PF18 240 aaPredicted RBP11.6□□□□□ -0.55
CTSD-201ENST00000236671 FAM159AQ6UWV7 190 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 LRRC75A-AS1Q8N1F1 130 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 TP53TG1Q9Y2A0 90 aa11.6□□□□□ -0.55
CTSD-201ENST00000236671 ZFP2Q6ZN57 461 aa11.59□□□□□ -0.55
CTSD-201ENST00000236671 A0A096LNT2 108 aa11.59□□□□□ -0.55
CTSD-201ENST00000236671 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
CTSD-201ENST00000236671 PRO0461Q9UI25 63 aa11.59□□□□□ -0.55
CTSD-201ENST00000236671 K7EMT4 169 aa11.58□□□□□ -0.56
CTSD-201ENST00000236671 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
CTSD-201ENST00000236671 A0A087WWL8 130 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 ID1P41134 155 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 CD300EQ496F6 205 aaPredicted RBP11.57□□□□□ -0.56
CTSD-201ENST00000236671 WFDC12Q8WWY7 111 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
CTSD-201ENST00000236671 CD7P09564 240 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
CTSD-201ENST00000236671 LINC01549A6NIU2 74 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 NDUFS8O00217 210 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 VCYO14598 125 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
CTSD-201ENST00000236671 PMVKQ15126 192 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 TMEM95Q3KNT9 176 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 KLHL30-AS1Q8NEE0 82 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 TMEM238C9JI98 176 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 UBE2D1P51668 147 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 EMP1P54849 157 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 SAMD13Q5VXD3 122 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 PGPEP1Q9NXJ5 209 aa11.56□□□□□ -0.56
CTSD-201ENST00000236671 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms