RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 IGLV2-11P01706 119 aa12.81□□□□□ -0.36
PTK7-202ENST00000230419 C16orf54Q6UWD8 224 aa12.81□□□□□ -0.36
PTK7-202ENST00000230419 SMAD5-AS1Q9Y6J3 95 aa12.81□□□□□ -0.36
PTK7-202ENST00000230419 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
PTK7-202ENST00000230419 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
PTK7-202ENST00000230419 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
PTK7-202ENST00000230419 EDN2P20800 178 aa12.8□□□□□ -0.36
PTK7-202ENST00000230419 CHCHD5Q9BSY4 110 aa12.8□□□□□ -0.36
PTK7-202ENST00000230419 PRSS29PA6NIE9 313 aa12.8□□□□□ -0.36
PTK7-202ENST00000230419 RPL39P62891 51 aaKnown RBP12.8□□□□□ -0.36
PTK7-202ENST00000230419 F8VRH5 84 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 K7EP13 123 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 AVPP01185 164 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 GATA3P23771 443 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 ZNF415Q09FC8 603 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 SMAGPQ0VAQ4 97 aa12.79□□□□□ -0.36
PTK7-202ENST00000230419 FLNAP21333 2647 aaKnown RBP12.79□□□□□ -0.36
PTK7-202ENST00000230419 IGHV4OR15-8A0A075B7B6 117 aa12.78□□□□□ -0.36
PTK7-202ENST00000230419 A0A087WW49 117 aa12.78□□□□□ -0.36
PTK7-202ENST00000230419 PRM2P04554 102 aa12.78□□□□□ -0.36
PTK7-202ENST00000230419 LINC01559Q495D7 138 aa12.78□□□□□ -0.36
PTK7-202ENST00000230419 GAGE13Q4V321 117 aa12.78□□□□□ -0.36
PTK7-202ENST00000230419 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
PTK7-202ENST00000230419 TMEM101Q96IK0 257 aa12.77□□□□□ -0.36
PTK7-202ENST00000230419 ETDBQ3ZM63 59 aa12.77□□□□□ -0.37
PTK7-202ENST00000230419 MRPL52Q86TS9 123 aaKnown RBP12.77□□□□□ -0.37
PTK7-202ENST00000230419 GAGE12JA6NER3 117 aa12.77□□□□□ -0.37
PTK7-202ENST00000230419 SRSF2Q01130 221 aaKnown RBP12.77□□□□□ -0.37
PTK7-202ENST00000230419 GAGE1Q13065 139 aa12.77□□□□□ -0.37
PTK7-202ENST00000230419 GAGE4Q13068 117 aa12.77□□□□□ -0.37
PTK7-202ENST00000230419 GAGE5Q13069 117 aa12.77□□□□□ -0.37
PTK7-202ENST00000230419 LINC01549A6NIU2 74 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 LINC01619G3V211 115 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 SPATA12Q7Z6I5 190 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 A0A1B0GV72 72 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 IGHG2P01859 326 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 C20orf173Q96LM9 149 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 SCRT2Q9NQ03 307 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 TRBV25-1A0A075B6N4 114 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 CTRLP40313 264 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 ITPR3Q14573 2671 aa12.76□□□□□ -0.37
PTK7-202ENST00000230419 INSP01308 110 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 HLA-DRB4P13762 266 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 GTSF1LQ9H1H1 148 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 HLA-DRB4X5D2U9 266 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 H3BMG7 143 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 TEX29Q8N6K0 151 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 OR5A1Q8NGJ0 315 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
PTK7-202ENST00000230419 RBAKDNA6NC62 111 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 PMVKQ15126 192 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 Q8N1Y9 231 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 PRORYQ9H606 182 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 H3BRM9 83 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 OCIAD2Q56VL3 154 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 ADAMTSL5Q6ZMM2 481 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
PTK7-202ENST00000230419 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 FXYD2P54710 66 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 ITPR1Q14643 2758 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 A0A087WX48 190 aa12.74□□□□□ -0.37
PTK7-202ENST00000230419 GAGE7O76087 117 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 GAGE12FP0CL80 117 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 GAGE12GP0CL81 117 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 GAGE12IP0CL82 117 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 KRTAP10-9P60411 292 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 DEFB125Q8N687 156 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 OPRPNQ99935 248 aaPredicted RBP12.73□□□□□ -0.37
PTK7-202ENST00000230419 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
PTK7-202ENST00000230419 SUMO4Q6EEV6 95 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
PTK7-202ENST00000230419 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 C11orf21Q9P2W6 132 aa12.73□□□□□ -0.37
PTK7-202ENST00000230419 C9orf47Q6ZRZ4 202 aa12.72□□□□□ -0.37
PTK7-202ENST00000230419 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
PTK7-202ENST00000230419 ERG28Q9UKR5 140 aa12.72□□□□□ -0.37
PTK7-202ENST00000230419 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
PTK7-202ENST00000230419 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
PTK7-202ENST00000230419 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
PTK7-202ENST00000230419 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
PTK7-202ENST00000230419 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
PTK7-202ENST00000230419 HELZ2Q9BYK8 2649 aaKnown RBP12.71□□□□□ -0.37
PTK7-202ENST00000230419 A0A096LPF7 62 aa12.71□□□□□ -0.38
PTK7-202ENST00000230419 ELANEP08246 267 aa12.71□□□□□ -0.38
PTK7-202ENST00000230419 LGALS1P09382 135 aaKnown RBP12.71□□□□□ -0.38
PTK7-202ENST00000230419 A6NDX4 124 aa12.7□□□□□ -0.38
PTK7-202ENST00000230419 TAX1BP3O14907 124 aa12.7□□□□□ -0.38
PTK7-202ENST00000230419 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
PTK7-202ENST00000230419 IGSF10Q6WRI0 2623 aa12.7□□□□□ -0.38
PTK7-202ENST00000230419 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
PTK7-202ENST00000230419 ODF1Q14990 250 aa12.7□□□□□ -0.38
PTK7-202ENST00000230419 I3L3M4 83 aa12.69□□□□□ -0.38
PTK7-202ENST00000230419 GATD1Q8NB37 220 aa12.69□□□□□ -0.38
PTK7-202ENST00000230419 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
PTK7-202ENST00000230419 URB1-AS1Q96HZ7 61 aa12.69□□□□□ -0.38
PTK7-202ENST00000230419 EBI3Q14213 229 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms