RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 C18orf32Q8TCD1 76 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 SETD2Q9BYW2 2564 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-216ENST00000641375 NTF3P20783 257 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
PHGDH-216ENST00000641375 LEPP41159 167 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 HINT1P49773 126 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-216ENST00000641375 TWIST1Q15672 202 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 SIGLEC8Q9NYZ4 499 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 K7ERU9 68 aa12.27□□□□□ -0.45
PHGDH-216ENST00000641375 CRLF1O75462 422 aa12.26□□□□□ -0.45
PHGDH-216ENST00000641375 SETXQ7Z333 2677 aaKnown RBP12.26□□□□□ -0.45
PHGDH-216ENST00000641375 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
PHGDH-216ENST00000641375 OR5AL1P0C617 328 aa12.26□□□□□ -0.45
PHGDH-216ENST00000641375 VAMP3Q15836 100 aa12.26□□□□□ -0.45
PHGDH-216ENST00000641375 SPAG8Q99932 426 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-216ENST00000641375 Q6ZQT7 251 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 Q6ZVH6 145 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 OR4C46A6NHA9 309 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 CD300EQ496F6 205 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-216ENST00000641375 MUC21Q5SSG8 566 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 KCNS1Q96KK3 526 aa12.25□□□□□ -0.45
PHGDH-216ENST00000641375 PRSS47A8MTI9 375 aa12.24□□□□□ -0.45
PHGDH-216ENST00000641375 SNAI2O43623 268 aa12.24□□□□□ -0.45
PHGDH-216ENST00000641375 FAM104BQ5XKR9 115 aa12.24□□□□□ -0.45
PHGDH-216ENST00000641375 RCHY1Q96PM5 261 aa12.24□□□□□ -0.45
PHGDH-216ENST00000641375 TMEM191AQ9H0A3 160 aa12.24□□□□□ -0.45
PHGDH-216ENST00000641375 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
PHGDH-216ENST00000641375 DEFB131AP59861 70 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 KIR3DS1Q14943 382 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 PRR31Q5SQ13 230 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 SORL1Q92673 2214 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 C7orf71A4D174 169 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 ASIPP42127 132 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 CACNG7P62955 275 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 NDUFA11Q86Y39 141 aa12.23□□□□□ -0.45
PHGDH-216ENST00000641375 ADARB2-AS1A8MUL3 147 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 FAM159AQ6UWV7 190 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
PHGDH-216ENST00000641375 IGHV4-4A0A075B6R2 117 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 IGKV3-20P01619 116 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 S100A4P26447 101 aaKnown RBP12.22□□□□□ -0.45
PHGDH-216ENST00000641375 AMTP48728 403 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
PHGDH-216ENST00000641375 H3BVH4 76 aa12.21□□□□□ -0.45
PHGDH-216ENST00000641375 C3orf79P0CE67 100 aa12.21□□□□□ -0.45
PHGDH-216ENST00000641375 HLA-DRB4P13762 266 aa12.21□□□□□ -0.45
PHGDH-216ENST00000641375 AMN1Q8IY45 258 aa12.21□□□□□ -0.45
PHGDH-216ENST00000641375 OR10AG1Q8NH19 301 aa12.21□□□□□ -0.45
PHGDH-216ENST00000641375 HLA-DRB4X5D2U9 266 aa12.21□□□□□ -0.45
PHGDH-216ENST00000641375 AGRNO00468 2067 aa12.21□□□□□ -0.46
PHGDH-216ENST00000641375 FLNBO75369 2602 aaKnown RBP12.21□□□□□ -0.46
PHGDH-216ENST00000641375 ZNF324O75467 553 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-216ENST00000641375 SPANXN1Q5VSR9 72 aa12.2□□□□□ -0.46
PHGDH-216ENST00000641375 NIT1Q86X76 327 aa12.2□□□□□ -0.46
PHGDH-216ENST00000641375 MAP6D1Q9H9H5 199 aa12.2□□□□□ -0.46
PHGDH-216ENST00000641375 MSRB1Q9NZV6 116 aa12.2□□□□□ -0.46
PHGDH-216ENST00000641375 ZNF256Q9Y2P7 627 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-216ENST00000641375 TRAV12-3A0A0B4J271 114 aa12.2□□□□□ -0.46
PHGDH-216ENST00000641375 AMTNQ6UX39 209 aa12.2□□□□□ -0.46
PHGDH-216ENST00000641375 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 A8MTW9 85 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 M0R2Z0 102 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 SPINK13Q1W4C9 94 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 ORMDL3Q8N138 153 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 H3BMM0 161 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 HSBP1O75506 76 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 MRPL51Q4U2R6 128 aaKnown RBP12.19□□□□□ -0.46
PHGDH-216ENST00000641375 PET117Q6UWS5 81 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 U3KQK5 164 aa12.19□□□□□ -0.46
PHGDH-216ENST00000641375 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 D6R8Y8 96 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 TAX1BP3O14907 124 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 SAP30O75446 220 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 RNASEKQ6P5S7 137 aaKnown RBP12.18□□□□□ -0.46
PHGDH-216ENST00000641375 CHCHD1Q96BP2 118 aaKnown RBP12.18□□□□□ -0.46
PHGDH-216ENST00000641375 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 GNRH2O43555 120 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 KRTAP10-3P60369 221 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
PHGDH-216ENST00000641375 C2CD3Q4AC94 2353 aa12.17□□□□□ -0.46
PHGDH-216ENST00000641375 PMCHP20382 165 aa12.17□□□□□ -0.46
PHGDH-216ENST00000641375 CKS2P33552 79 aa12.17□□□□□ -0.46
PHGDH-216ENST00000641375 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
PHGDH-216ENST00000641375 TIMM8BQ9Y5J9 83 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-216ENST00000641375 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
PHGDH-216ENST00000641375 DEFB125Q8N687 156 aa12.16□□□□□ -0.46
PHGDH-216ENST00000641375 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
PHGDH-216ENST00000641375 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
PHGDH-216ENST00000641375 CD7P09564 240 aa12.15□□□□□ -0.46
PHGDH-216ENST00000641375 EVI2AP22794 236 aa12.15□□□□□ -0.46
PHGDH-216ENST00000641375 CMC4P56277 68 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-216ENST00000641375 IGLV1-51P01701 117 aa12.15□□□□□ -0.47
PHGDH-216ENST00000641375 PF4P02776 101 aa12.15□□□□□ -0.47
PHGDH-216ENST00000641375 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms