RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 CFC1P0CG37 223 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 HLA-DMBP28068 263 aa9.55□□□□□ -0.88
MATR3-227ENST00000618441 IGLV3-12A0A075B6K2 115 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 DUSP14O95147 198 aaKnown RBP9.54□□□□□ -0.88
MATR3-227ENST00000618441 NDUFA7O95182 113 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 IGHV3-23P01764 117 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 CCL3L1P16619 93 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
MATR3-227ENST00000618441 Q0VFX4 171 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 LINC01620Q4KN68 170 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 M0R381 172 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 VPREB1P12018 145 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 LGALS3P17931 250 aaKnown RBP9.54□□□□□ -0.88
MATR3-227ENST00000618441 ZCCHC24Q8N2G6 241 aaKnown RBP9.54□□□□□ -0.88
MATR3-227ENST00000618441 NTN3O00634 580 aaPredicted RBP9.54□□□□□ -0.88
MATR3-227ENST00000618441 VMA21Q3ZAQ7 101 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 MRPL55Q7Z7F7 128 aaKnown RBP9.54□□□□□ -0.88
MATR3-227ENST00000618441 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 LINC01587Q99440 93 aa9.54□□□□□ -0.88
MATR3-227ENST00000618441 hADV29S1A0JD25 119 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 TIMM23O14925 209 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 ATXN8Q156A1 80 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 Q8N8P6 123 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 SHISA9B4DS77 424 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 TM4SF5O14894 197 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 RPL27AP46776 148 aaKnown RBP9.53□□□□□ -0.88
MATR3-227ENST00000618441 UBE2D3P61077 147 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 UBE2D2P62837 147 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 ERCC8Q13216 396 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 NSUN5P1Q3KNT7 163 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 ADGRG4Q8IZF6 3080 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 FAM27E3Q08E93 113 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 PRR25Q96S07 402 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 PCSK5Q92824 1860 aa9.53□□□□□ -0.88
MATR3-227ENST00000618441 DLX6P56179 175 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 TRBV19A0A075B6N1 114 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 IGHV3-66A0A0C4DH42 116 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 CCL24O00175 119 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 ZNF80P51504 273 aaPredicted RBP9.52□□□□□ -0.89
MATR3-227ENST00000618441 RELNP78509 3460 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 MAP1AP78559 2803 aaPredicted RBP9.52□□□□□ -0.89
MATR3-227ENST00000618441 IQCF6A8MYZ5 107 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 CECR9P0C854 216 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 SPRNQ5BIV9 151 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 U3KQE9 123 aa9.52□□□□□ -0.89
MATR3-227ENST00000618441 CSPG4Q6UVK1 2322 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 C17orf58Q2M2W7 97 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 SIGLEC9Q9Y336 463 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 TEX22C9J3V5 150 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 S100A4P26447 101 aaKnown RBP9.51□□□□□ -0.89
MATR3-227ENST00000618441 IMMP1LQ96LU5 166 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 ZZEF1O43149 2961 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 CCDC168Q8NDH2 2452 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 U3KQK5 164 aa9.51□□□□□ -0.89
MATR3-227ENST00000618441 ELANEP08246 267 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 UBE2D1P51668 147 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 C2orf48Q96LS8 159 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 IGHV3-49A0A0A0MS15 119 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 INS-IGF2F8WCM5 200 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 NACAE9PAV3 2078 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 Q6ZS92 163 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 RITA1Q96K30 269 aa9.5□□□□□ -0.89
MATR3-227ENST00000618441 FSTL3O95633 263 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 CNTFRP26992 372 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 C3orf22Q8N5N4 141 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 PIFOQ8TCI5 191 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 Q96MF0 132 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 WISP2O76076 250 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 C2orf66Q6UXQ4 117 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
MATR3-227ENST00000618441 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 COL4A2P08572 1712 aa9.49□□□□□ -0.89
MATR3-227ENST00000618441 SPANXA1Q9NS26 97 aa9.48□□□□□ -0.89
MATR3-227ENST00000618441 COX6CP09669 75 aa9.48□□□□□ -0.89
MATR3-227ENST00000618441 PRR30Q53SZ7 412 aaPredicted RBP9.48□□□□□ -0.89
MATR3-227ENST00000618441 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
MATR3-227ENST00000618441 LGALS9O00182 355 aa9.48□□□□□ -0.89
MATR3-227ENST00000618441 PAX8Q06710 450 aa9.48□□□□□ -0.89
MATR3-227ENST00000618441 F5H697 171 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
MATR3-227ENST00000618441 A0A0J9YY99 117 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 TMEM219Q86XT9 240 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 MUSTN1Q8IVN3 82 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 TRACP01848 142 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 Q6Q795 121 aa9.47□□□□□ -0.89
MATR3-227ENST00000618441 MBD3L2Q8NHZ7 208 aaPredicted RBP9.47□□□□□ -0.89
MATR3-227ENST00000618441 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
MATR3-227ENST00000618441 M0R2P5 195 aa9.46□□□□□ -0.89
MATR3-227ENST00000618441 WT1P19544 449 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms