RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF134P52741 427 aa11.96□□□□□ -0.49
COL5A1-208ENST00000618395 NOTCH4Q99466 2003 aa11.96□□□□□ -0.49
COL5A1-208ENST00000618395 C5orf67F2Z3F1 127 aa11.96□□□□□ -0.5
COL5A1-208ENST00000618395 THSD7AQ9UPZ6 1657 aa11.96□□□□□ -0.5
COL5A1-208ENST00000618395 IGKV1-16P04430 117 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 MINOS1Q5TGZ0 78 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 MINOS1-NBL1R4GNA1 71 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 MLANAQ16655 118 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 LINC00173Q6ZV60 143 aa11.95□□□□□ -0.5
COL5A1-208ENST00000618395 PRR19A6NJB7 356 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
COL5A1-208ENST00000618395 LTBRP36941 435 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 PATE3B3GLJ2 98 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 LECT2O14960 151 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 BLCAPP62952 87 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 RHPN1-AS1Q9BWJ2 59 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 OOSP1A8MZH6 123 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 EFNA2O43921 213 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 ASPHD1Q5U4P2 390 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 IGHV4-4A0A075B6R2 117 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 C1orf53Q5VUE5 145 aa11.94□□□□□ -0.5
COL5A1-208ENST00000618395 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 TFF2Q03403 129 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 SPINK13Q1W4C9 94 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 IGHV3-38A0A0C4DH36 116 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 USP17L23D6RBM5 183 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 IGKV4-1P06312 121 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 DEFB130BP0DP73 79 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 DEFB130AP0DP74 79 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
COL5A1-208ENST00000618395 RPL18AQ02543 176 aaKnown RBP11.92□□□□□ -0.5
COL5A1-208ENST00000618395 FAM19A5Q7Z5A7 132 aaPredicted RBP11.92□□□□□ -0.5
COL5A1-208ENST00000618395 SERP1Q9Y6X1 66 aa11.92□□□□□ -0.5
COL5A1-208ENST00000618395 VOPP1Q96AW1 172 aa11.92□□□□□ -0.5
COL5A1-208ENST00000618395 GLI3P10071 1580 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 BPY2O14599 106 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 ODF1Q14990 250 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 XCL1P47992 114 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 ANGP03950 147 aaKnown RBP11.91□□□□□ -0.5
COL5A1-208ENST00000618395 LINC00205P59089 165 aa11.91□□□□□ -0.5
COL5A1-208ENST00000618395 CSDC2Q9Y534 153 aaKnown RBP11.91□□□□□ -0.5
COL5A1-208ENST00000618395 K7EM74 188 aa11.9□□□□□ -0.5
COL5A1-208ENST00000618395 DAZ2Q13117 558 aaKnown RBP11.9□□□□□ -0.5
COL5A1-208ENST00000618395 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
COL5A1-208ENST00000618395 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
COL5A1-208ENST00000618395 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
COL5A1-208ENST00000618395 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
COL5A1-208ENST00000618395 IGKV2D-26A0A0A0MRZ7 120 aa11.9□□□□□ -0.5
COL5A1-208ENST00000618395 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
COL5A1-208ENST00000618395 LINC01560Q8TB33 94 aa11.9□□□□□ -0.5
COL5A1-208ENST00000618395 H3BRN7 92 aa11.9□□□□□ -0.51
COL5A1-208ENST00000618395 FAM27E3Q08E93 113 aa11.9□□□□□ -0.51
COL5A1-208ENST00000618395 ENHOQ6UWT2 76 aa11.89□□□□□ -0.51
COL5A1-208ENST00000618395 CD177Q8N6Q3 437 aa11.89□□□□□ -0.51
COL5A1-208ENST00000618395 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
COL5A1-208ENST00000618395 IGLV3-32A0A0A0MS00 114 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 ZFP36L1Q07352 338 aaKnown RBP11.88□□□□□ -0.51
COL5A1-208ENST00000618395 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 A0A087WW49 117 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 CFHR1Q03591 330 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 TEX22C9J3V5 150 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 TOMM6Q96B49 74 aa11.88□□□□□ -0.51
COL5A1-208ENST00000618395 DAND5Q8N907 189 aa11.87□□□□□ -0.51
COL5A1-208ENST00000618395 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
COL5A1-208ENST00000618395 SNURFQ9Y675 71 aa11.87□□□□□ -0.51
COL5A1-208ENST00000618395 CASC2Q6XLA1 102 aa11.87□□□□□ -0.51
COL5A1-208ENST00000618395 SONP18583 2426 aaKnown RBP11.87□□□□□ -0.51
COL5A1-208ENST00000618395 CLPSL2Q6UWE3 100 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-208ENST00000618395 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-208ENST00000618395 CFHR3Q02985 330 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 IGHV1-46P01743 117 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 MRPL36Q9P0J6 103 aaKnown RBP11.86□□□□□ -0.51
COL5A1-208ENST00000618395 SERTAD4-AS1Q5TG53 156 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
COL5A1-208ENST00000618395 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 SAP25Q8TEE9 199 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 KIAA1671Q9BY89 1806 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
COL5A1-208ENST00000618395 TGFBR3LH3BV60 316 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 GNLYP22749 145 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 UBE2E1P51965 193 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 H0Y9J4 135 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
COL5A1-208ENST00000618395 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
COL5A1-208ENST00000618395 Q6Q795 121 aa11.84□□□□□ -0.51
COL5A1-208ENST00000618395 TM2D2Q9BX73 214 aa11.84□□□□□ -0.51
COL5A1-208ENST00000618395 RMI2Q96E14 147 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms