RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 TRBV20-1A0A075B6N2 111 aa12.04□□□□□ -0.48
PTPRT-210ENST00000617474 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
PTPRT-210ENST00000617474 TNRC6AQ8NDV7 1962 aaKnown RBP12.04□□□□□ -0.48
PTPRT-210ENST00000617474 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
PTPRT-210ENST00000617474 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
PTPRT-210ENST00000617474 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
PTPRT-210ENST00000617474 RASL10AQ92737 203 aa12.04□□□□□ -0.48
PTPRT-210ENST00000617474 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 HIST1H4AP62805 103 aaKnown RBP12.03□□□□□ -0.48
PTPRT-210ENST00000617474 CFHR3Q02985 330 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 C8orf31Q8N9H6 132 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 IGLL5B9A064 214 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 NDUFA4O00483 81 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
PTPRT-210ENST00000617474 C19orf71A6NCJ1 209 aa12.02□□□□□ -0.48
PTPRT-210ENST00000617474 CGB3P0DN86 165 aa12.02□□□□□ -0.48
PTPRT-210ENST00000617474 CGB7P0DN87 165 aa12.02□□□□□ -0.48
PTPRT-210ENST00000617474 C22orf34Q6ZV56 151 aa12.02□□□□□ -0.48
PTPRT-210ENST00000617474 TMEM86BQ8N661 226 aa12.02□□□□□ -0.48
PTPRT-210ENST00000617474 SLC25A20O43772 301 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 IGLV1-47P01700 117 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 TMEM141Q96I45 108 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 I3L3M4 83 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 MSMBP08118 114 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 C6orf226Q5I0X4 101 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 IGFL2Q6UWQ7 119 aa12.02□□□□□ -0.49
PTPRT-210ENST00000617474 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 GAGE4Q13068 117 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 GAGE5Q13069 117 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 DAZAP2Q15038 168 aaPredicted RBP12.01□□□□□ -0.49
PTPRT-210ENST00000617474 NTN5Q8WTR8 489 aaPredicted RBP12.01□□□□□ -0.49
PTPRT-210ENST00000617474 LTBP2Q14767 1821 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 H3BMM0 161 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 CR1LQ2VPA4 569 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
PTPRT-210ENST00000617474 A0A1B0GXF2 115 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 BUB3O43684 328 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 TAL2Q16559 108 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 C20orf78Q9BR46 151 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 EML5Q05BV3 1969 aa12.01□□□□□ -0.49
PTPRT-210ENST00000617474 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
PTPRT-210ENST00000617474 TCTEX1D4Q5JR98 221 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 PIP4P1Q86T03 277 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 ATP6V0BQ99437 205 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 NUP210LQ5VU65 1888 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 INSP01308 110 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 BOD1L2Q8IYS8 172 aa12□□□□□ -0.49
PTPRT-210ENST00000617474 ZNRF2Q8NHG8 242 aa11.99□□□□□ -0.49
PTPRT-210ENST00000617474 RANBP2P49792 3224 aaKnown RBP11.99□□□□□ -0.49
PTPRT-210ENST00000617474 PFN2P35080 140 aa11.99□□□□□ -0.49
PTPRT-210ENST00000617474 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
PTPRT-210ENST00000617474 HIVEP2P31629 2446 aa11.99□□□□□ -0.49
PTPRT-210ENST00000617474 HOXB4P17483 251 aaPredicted RBP11.98□□□□□ -0.49
PTPRT-210ENST00000617474 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 RNF223E7ERA6 249 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 LEPROTO15243 131 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
PTPRT-210ENST00000617474 JPT2Q9H910 190 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 CRYGCP07315 174 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 BLCAPP62952 87 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 FOXI2Q6ZQN5 318 aa11.98□□□□□ -0.49
PTPRT-210ENST00000617474 ZNF80P51504 273 aaPredicted RBP11.97□□□□□ -0.49
PTPRT-210ENST00000617474 EDA2RQ9HAV5 297 aa11.97□□□□□ -0.49
PTPRT-210ENST00000617474 A0A0C4DFX4 3053 aa11.97□□□□□ -0.49
PTPRT-210ENST00000617474 CENPVL3A0A0U1RRI6 287 aa11.97□□□□□ -0.49
PTPRT-210ENST00000617474 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
PTPRT-210ENST00000617474 MBD6Q96DN6 1003 aa11.97□□□□□ -0.49
PTPRT-210ENST00000617474 BRCA2P51587 3418 aa11.97□□□□□ -0.49
PTPRT-210ENST00000617474 ODF1Q14990 250 aa11.96□□□□□ -0.49
PTPRT-210ENST00000617474 RS1O15537 224 aa11.96□□□□□ -0.49
PTPRT-210ENST00000617474 ZNF48Q96MX3 618 aaPredicted RBP11.96□□□□□ -0.49
PTPRT-210ENST00000617474 MLST8Q9BVC4 326 aa11.96□□□□□ -0.49
PTPRT-210ENST00000617474 A0A0J9YXV3 536 aa11.96□□□□□ -0.5
PTPRT-210ENST00000617474 Q8N9W7 124 aa11.96□□□□□ -0.5
PTPRT-210ENST00000617474 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.5
PTPRT-210ENST00000617474 SPAG8Q99932 426 aaPredicted RBP11.96□□□□□ -0.5
PTPRT-210ENST00000617474 CTRLP40313 264 aa11.95□□□□□ -0.5
PTPRT-210ENST00000617474 INS-IGF2F8WCM5 200 aa11.95□□□□□ -0.5
PTPRT-210ENST00000617474 Q8N7P7 452 aa11.95□□□□□ -0.5
PTPRT-210ENST00000617474 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
PTPRT-210ENST00000617474 CFC1P0CG37 223 aa11.95□□□□□ -0.5
PTPRT-210ENST00000617474 LGALS1P09382 135 aaKnown RBP11.94□□□□□ -0.5
PTPRT-210ENST00000617474 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
PTPRT-210ENST00000617474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.94□□□□□ -0.5
PTPRT-210ENST00000617474 WI2-2373I1.2A0A1W2PRP0 233 aa11.94□□□□□ -0.5
PTPRT-210ENST00000617474 IGKV2-29A2NJV5 120 aaPredicted RBP11.94□□□□□ -0.5
PTPRT-210ENST00000617474 PTH2Q96A98 100 aa11.94□□□□□ -0.5
PTPRT-210ENST00000617474 A4D1N5 150 aa11.93□□□□□ -0.5
PTPRT-210ENST00000617474 NPBQ8NG41 125 aa11.93□□□□□ -0.5
PTPRT-210ENST00000617474 LAMTOR3Q9UHA4 124 aa11.93□□□□□ -0.5
PTPRT-210ENST00000617474 ABCA12Q86UK0 2595 aa11.93□□□□□ -0.5
PTPRT-210ENST00000617474 RHODO00212 210 aa11.93□□□□□ -0.5
PTPRT-210ENST00000617474 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms