RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
SMN2-213ENST00000614240 TOR2AQ5JU69 321 aa11.86□□□□□ -0.51
SMN2-213ENST00000614240 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
SMN2-213ENST00000614240 PTH2Q96A98 100 aa11.86□□□□□ -0.51
SMN2-213ENST00000614240 MARVELD1Q9BSK0 173 aa11.86□□□□□ -0.51
SMN2-213ENST00000614240 HERC1Q15751 4861 aa11.85□□□□□ -0.51
SMN2-213ENST00000614240 LECT2O14960 151 aa11.85□□□□□ -0.51
SMN2-213ENST00000614240 S100A4P26447 101 aaKnown RBP11.85□□□□□ -0.51
SMN2-213ENST00000614240 FLI1Q01543 452 aaPredicted RBP11.85□□□□□ -0.51
SMN2-213ENST00000614240 IFITM3Q01628 133 aa11.85□□□□□ -0.51
SMN2-213ENST00000614240 LGALSLQ3ZCW2 172 aaPredicted RBP11.85□□□□□ -0.51
SMN2-213ENST00000614240 HSD17B11Q8NBQ5 300 aa11.85□□□□□ -0.51
SMN2-213ENST00000614240 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.84□□□□□ -0.51
SMN2-213ENST00000614240 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 GCHFRP30047 84 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
SMN2-213ENST00000614240 WFDC2Q14508 124 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 SAPCD1Q5SSQ6 148 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 Q8N3U1 123 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
SMN2-213ENST00000614240 A8MWV9 139 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
SMN2-213ENST00000614240 DEFA1P59665 94 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 DEFA3P59666 94 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 LINC00528Q8N1L1 170 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 CYB561D1Q8N8Q1 229 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 OR2T35Q8NGX2 323 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 PARLQ9H300 379 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 EPDR1Q9UM22 224 aa11.83□□□□□ -0.52
SMN2-213ENST00000614240 IGLV2-11P01706 119 aa11.82□□□□□ -0.52
SMN2-213ENST00000614240 ZFP2Q6ZN57 461 aa11.82□□□□□ -0.52
SMN2-213ENST00000614240 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
SMN2-213ENST00000614240 DAZ3Q9NR90 486 aaKnown RBP11.82□□□□□ -0.52
SMN2-213ENST00000614240 COX11Q9Y6N1 276 aa11.82□□□□□ -0.52
SMN2-213ENST00000614240 URGCP-MRPS24S4R325 110 aa11.82□□□□□ -0.52
SMN2-213ENST00000614240 A0A087WWC5 75 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 MBP02144 154 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 ASIPP42127 132 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 FGF8P55075 233 aaPredicted RBP11.81□□□□□ -0.52
SMN2-213ENST00000614240 OR2G3Q8NGZ4 309 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 BAALCQ8WXS3 180 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 RMI2Q96E14 147 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 TMEM167BQ9NRX6 74 aa11.81□□□□□ -0.52
SMN2-213ENST00000614240 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
SMN2-213ENST00000614240 CXorf1O96002 111 aa11.8□□□□□ -0.52
SMN2-213ENST00000614240 Q6ZSA8 131 aa11.8□□□□□ -0.52
SMN2-213ENST00000614240 SUN5Q8TC36 379 aa11.8□□□□□ -0.52
SMN2-213ENST00000614240 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
SMN2-213ENST00000614240 PSMG3Q9BT73 122 aaPredicted RBP11.79□□□□□ -0.52
SMN2-213ENST00000614240 SAMD10Q9BYL1 202 aa11.79□□□□□ -0.52
SMN2-213ENST00000614240 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
SMN2-213ENST00000614240 TRAV34A0A0B4J273 112 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 IFNA7P01567 189 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 ATP6V0CP27449 155 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 LINC01620Q4KN68 170 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 Q8N976 141 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 JPT2Q9H910 190 aa11.78□□□□□ -0.52
SMN2-213ENST00000614240 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
SMN2-213ENST00000614240 KRTAP29-1A8MX34 341 aaPredicted RBP11.77□□□□□ -0.53
SMN2-213ENST00000614240 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
SMN2-213ENST00000614240 SERF2P84101 59 aa11.77□□□□□ -0.53
SMN2-213ENST00000614240 C14orf178Q8N769 122 aaPredicted RBP11.77□□□□□ -0.53
SMN2-213ENST00000614240 LINC00479Q96M42 142 aa11.77□□□□□ -0.53
SMN2-213ENST00000614240 Q9UF83 564 aa11.77□□□□□ -0.53
SMN2-213ENST00000614240 B4DEV8 164 aa11.76□□□□□ -0.53
SMN2-213ENST00000614240 RHODO00212 210 aa11.76□□□□□ -0.53
SMN2-213ENST00000614240 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
SMN2-213ENST00000614240 KLK12Q9UKR0 248 aa11.76□□□□□ -0.53
SMN2-213ENST00000614240 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
SMN2-213ENST00000614240 A0A1W2PRE2 83 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 H3BVH4 76 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 KCNIP4Q6PIL6 250 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 SCXQ7RTU7 201 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 IL36BQ9NZH7 164 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 TNFSF18Q9UNG2 199 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 FAT1Q14517 4588 aa11.75□□□□□ -0.53
SMN2-213ENST00000614240 A0A087WX48 190 aa11.74□□□□□ -0.53
SMN2-213ENST00000614240 UFSP1Q6NVU6 142 aa11.74□□□□□ -0.53
SMN2-213ENST00000614240 NIT1Q86X76 327 aa11.74□□□□□ -0.53
SMN2-213ENST00000614240 OR11H4Q8NGC9 324 aa11.74□□□□□ -0.53
SMN2-213ENST00000614240 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
SMN2-213ENST00000614240 M0R036 132 aa11.73□□□□□ -0.53
SMN2-213ENST00000614240 ARMS2P0C7Q2 107 aa11.73□□□□□ -0.53
SMN2-213ENST00000614240 UBE2G2P60604 165 aa11.73□□□□□ -0.53
SMN2-213ENST00000614240 ELOBQ15370 118 aa11.73□□□□□ -0.53
SMN2-213ENST00000614240 UBE2WQ96B02 151 aa11.73□□□□□ -0.53
SMN2-213ENST00000614240 AQP10Q96PS8 301 aa11.73□□□□□ -0.53
SMN2-213ENST00000614240 A0A087WWL8 130 aa11.72□□□□□ -0.53
SMN2-213ENST00000614240 GRIFINA4D1Z8 144 aa11.72□□□□□ -0.53
SMN2-213ENST00000614240 RNF222A6NCQ9 220 aa11.72□□□□□ -0.53
SMN2-213ENST00000614240 PEX7O00628 323 aa11.72□□□□□ -0.53
SMN2-213ENST00000614240 Q86TA4 180 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms