RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SLC17A3O00476 420 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF861PO60384 105 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 NMBP08949 121 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 HIST1H1EP10412 219 aaKnown RBP2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 H2BFSP57053 126 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 FXYD7P58549 80 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 TAS2R60P59551 318 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 DEFA1P59665 94 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 DEFA3P59666 94 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 S100A10P60903 97 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 HIST1H1AQ02539 215 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 FGL1Q08830 312 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 SPINK13Q1W4C9 94 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 LGALS9BQ3B8N2 356 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 MIC13Q5XKP0 118 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 RPP25LQ8N5L8 163 aaKnown RBP2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 C15orf53Q8NAA6 179 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR5C1Q8NGR4 320 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR10J6PQ8NGY7 276 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 LRRC20Q8TCA0 184 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM263Q8WUH6 116 aaKnown RBP2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 LINC00477Q96M19 166 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM208Q9BTX3 173 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 NPCDR1Q9BY65 106 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 PARD6GQ9BYG4 376 aaPredicted RBP2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 KCNIP2Q9NS61 270 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF586Q9NXT0 402 aa2.34□□□□□ -2.03
CKS1BP3-201ENST00000600888 VPS13DQ5THJ4 4388 aa2.34□□□□□ -2.04
CKS1BP3-201ENST00000600888 FRAS1Q86XX4 4008 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 UBE2L5PA0A1B0GUS4 154 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 RBAKDNA6NC62 111 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF705GA8MUZ8 300 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 C17orf112F2Z3M2 114 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 H3BNG1 76 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 SIX6O95475 246 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 MPC2O95563 127 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 SLC25A5P05141 298 aaKnown RBP2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 ATP5G1P05496 136 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 NBEAP1P0C6P0 100 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 PET100P0DJ07 73 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 CRISP2P16562 243 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 FGF7P21781 194 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 ATP5G3P48201 142 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 DAD1P61803 113 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 RHOBP62745 196 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 DAZ2Q13117 558 aaKnown RBP2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 LINC00336Q6ZUF6 198 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 BAP18Q8IXM2 172 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 LYPD1Q8N2G4 141 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 PPP1R1CQ8WVI7 109 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 FAM167A-AS1Q96KT0 104 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 FAM19A4Q96LR4 140 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 C18orf15Q96N68 181 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 LINC00467Q9BRT7 94 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 WDR61Q9GZS3 305 aaKnown RBP2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR51M1Q9H341 326 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 OR5AC2Q9NZP5 309 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 HSPB11Q9Y547 144 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 TIMM8BQ9Y5J9 83 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 LENEPQ9Y5L5 61 aa2.33□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRAV12-2A0A075B6T6 113 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRAV5A0A0B4J249 113 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 M0R3E3 92 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 SSNA1O43805 119 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 PTTG1O95997 202 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 PYYP10082 97 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 RPL12P30050 165 aaKnown RBP2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 LEPP41159 167 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 EMP1P54849 157 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 GCSAMLQ5JQS6 135 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 IBA57Q5T440 356 aaKnown RBP2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF767PQ75MW2 155 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZFAND2AQ8N6M9 145 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 FXYD5Q96DB9 178 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 LINC01587Q99440 93 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 ATP5SQ99766 215 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 SLC25A2Q9BXI2 301 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 AGPAT4-IT1Q9H0P7 198 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF492Q9P255 531 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 FUT9Q9Y231 359 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 TIMM9Q9Y5J7 89 aa2.32□□□□□ -2.04
CKS1BP3-201ENST00000600888 DNAH10Q8IVF4 4471 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 TRAV12-3A0A0B4J271 114 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 C7orf71A4D174 169 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 FAM74A7A6NL05 159 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 IFNA5P01569 189 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 PRM2P04554 102 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 DEFB130BP0DP73 79 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 DEFB130AP0DP74 79 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 M6PRP20645 277 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF138P52744 262 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 TCL1AP56279 114 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 TAS2R45P59539 299 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 SERF2P84101 59 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 ZNF266Q14584 549 aa2.31□□□□□ -2.04
CKS1BP3-201ENST00000600888 CLINT1Q14677 625 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms