RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 GTSCR1Q86UQ5 136 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 SRSF12Q8WXF0 261 aaKnown RBP3.38□□□□□ -1.87
LRIT3-202ENST00000594814 TOMM6Q96B49 74 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
LRIT3-202ENST00000594814 Q9H8V8 135 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 C16orf97H3BN30 126 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 CXCL13O43927 109 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 CD3EP07766 207 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 INAFM2P0DMQ5 153 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 DEFA4P12838 97 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 CCL8P80075 99 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 HOXA4Q00056 320 aaPredicted RBP3.38□□□□□ -1.87
LRIT3-202ENST00000594814 FAM27E3Q08E93 113 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 GTF3C1Q12789 2109 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF474Q6S9Z5 364 aaPredicted RBP3.38□□□□□ -1.87
LRIT3-202ENST00000594814 SLC50A1Q9BRV3 221 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 AGPAT4-IT1Q9H0P7 198 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 SVILO95425 2214 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 ZANQ9Y493 2812 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 TRAV17A0A0B4J275 112 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 LOC107984156A0A0G2JMH3 177 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 CFC1BP0CG36 223 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 CFC1P0CG37 223 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF137PP52743 207 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 ATP5EP2Q5VTU8 51 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 HIST2H2BCQ6DN03 193 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 HIST2H2BDQ6DRA6 164 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 ARL17AQ8IVW1 177 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 LINC01356Q8N9X3 169 aa3.38□□□□□ -1.87
LRIT3-202ENST00000594814 GCN1Q92616 2671 aaKnown RBP3.38□□□□□ -1.87
LRIT3-202ENST00000594814 PLA2G1BP04054 148 aaKnown RBP3.37□□□□□ -1.87
LRIT3-202ENST00000594814 SRSF9Q13242 221 aaKnown RBP eCLIP3.37□□□□□ -1.87
LRIT3-202ENST00000594814 PRIMA1Q86XR5 153 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 NEXN-AS1Q8NBZ9 246 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF256Q9Y2P7 627 aaPredicted RBP3.37□□□□□ -1.87
LRIT3-202ENST00000594814 IGKV1OR2-108A0A075B7D4 117 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 IGHV3-30P01768 117 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 IGHV3-30-5P0DP03 117 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 RPL7P18124 248 aaKnown RBP3.37□□□□□ -1.87
LRIT3-202ENST00000594814 GLRXP35754 106 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 PATE2Q6UY27 113 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 ZC2HC1AQ96GY0 325 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 NCOA6Q14686 2063 aaPredicted RBP3.37□□□□□ -1.87
LRIT3-202ENST00000594814 TRBV19A0A075B6N1 114 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 TIMM17BO60830 172 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 IGHV3-33P01772 117 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 CGB3P0DN86 165 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 CGB7P0DN87 165 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 LINC00322Q6ZN03 302 aaPredicted RBP3.37□□□□□ -1.87
LRIT3-202ENST00000594814 LINC00311Q8N616 119 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 C20orf173Q96LM9 149 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 HS3ST6Q96QI5 342 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 CALYQ9NYX4 217 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 SELENOKQ9Y6D0 94 aa3.37□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF462Q96JM2 2506 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TANC2Q9HCD6 1990 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 IGKV1D-37A0A075B6S9 117 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 A0A0J9YY99 117 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 MRPL33O75394 65 aaKnown RBP3.36□□□□□ -1.87
LRIT3-202ENST00000594814 S100A7L2Q5SY68 101 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 ASPHD1Q5U4P2 390 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 SCGB1D4Q6XE38 83 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 ZFP2Q6ZN57 461 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF833PQ6ZTB9 187 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 C9orf139Q6ZV77 190 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 RNF185Q96GF1 192 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 BBC3Q96PG8 261 aaPredicted RBP3.36□□□□□ -1.87
LRIT3-202ENST00000594814 RNF5Q99942 180 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
LRIT3-202ENST00000594814 GNG12Q9UBI6 72 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 MED12LQ86YW9 2145 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TRAV40A0A0B4J280 105 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 ZNF138P52744 262 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 LYZL1Q6UWQ5 148 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 SERP2Q8N6R1 65 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 MAPKAPK5-AS1Q8N8E1 139 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
LRIT3-202ENST00000594814 DPH3Q96FX2 82 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 METTL26Q96S19 204 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 SHANK2-AS3Q9BTD1 123 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 LENEPQ9Y5L5 61 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 FAM215AQ9Y5M1 114 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 A0A0G2JNJ9 132 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 H3BRN7 92 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TRPT1Q86TN4 253 aaKnown RBP3.36□□□□□ -1.87
LRIT3-202ENST00000594814 C9orf106Q8NAJ2 232 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TIMM17AQ99595 171 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 Q9UFV3 132 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TIMM8BQ9Y5J9 83 aaPredicted RBP3.36□□□□□ -1.87
LRIT3-202ENST00000594814 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
LRIT3-202ENST00000594814 TRAV8-1A0A0A6YYK1 113 aa3.35□□□□□ -1.87
LRIT3-202ENST00000594814 PRB1P04280 392 aa3.35□□□□□ -1.87
LRIT3-202ENST00000594814 PYYP10082 97 aa3.35□□□□□ -1.87
LRIT3-202ENST00000594814 VMA21Q3ZAQ7 101 aa3.35□□□□□ -1.87
LRIT3-202ENST00000594814 SPINK9Q5DT21 86 aa3.35□□□□□ -1.87
LRIT3-202ENST00000594814 CD164L2Q6UWJ8 174 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms