RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 Q6ZN92 141 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 GPHB5Q86YW7 130 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 RNF182Q8N6D2 247 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 ZNF738Q8NE65 137 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 OR4X2Q8NGF9 303 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 Q8TAT8 98 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 TMEM158Q8WZ71 300 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 ZNF747Q9BV97 191 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 C16orf95Q9H693 158 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 DAZ1Q9NQZ3 744 aaKnown RBP4.35□□□□□ -1.71
SDF2-206ENST00000587788 UFC1Q9Y3C8 167 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 IGHV3OR16-8A0A075B7F1 116 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 TRAV21A0A0B4J279 112 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 TMEM213A2RRL7 107 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 PRSS47A8MTI9 375 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 SOCS3O14543 225 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 TCAPO15273 167 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 SNAI2O43623 268 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 PPP1R17O96001 155 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 HBDP02042 147 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 CSN3P07498 182 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 PSMB8P28062 276 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 HLA-DMBP28068 263 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 TSPOP30536 169 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 LGALS9BQ3B8N2 356 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 LGALS9CQ6DKI2 356 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 AMN1Q8IY45 258 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 OR1N2Q8NGR9 330 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 MRAP2Q96G30 205 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 UBE2E2Q96LR5 201 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 SIGLEC8Q9NYZ4 499 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 PEF1Q9UBV8 284 aaKnown RBP4.34□□□□□ -1.71
SDF2-206ENST00000587788 SMPXQ9UHP9 88 aa4.34□□□□□ -1.71
SDF2-206ENST00000587788 IGKV3D-20A0A0C4DH25 116 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 GAGE12BA1L429 117 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 GAGE12HA6NDE8 117 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 K7EMI3 77 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 M0QZ24 198 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 ZNF207O43670 478 aaKnown RBP4.33□□□□□ -1.72
SDF2-206ENST00000587788 IGLL1P15814 213 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 FCER1GP30273 86 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 IFI27P40305 119 aaPredicted RBP4.33□□□□□ -1.72
SDF2-206ENST00000587788 GAGE1Q13065 139 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 SLC25A34Q6PIV7 304 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 Q8N8P6 123 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 OR8A1Q8NGG7 326 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 SPATA3Q8NHX4 192 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 C20orf173Q96LM9 149 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 ODF3Q96PU9 254 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 RHPN1-AS1Q9BWJ2 59 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 ZNF702PQ9H963 129 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 LINC00527Q9UJ94 153 aa4.33□□□□□ -1.72
SDF2-206ENST00000587788 IGHV3OR16-13A0A075B7E8 117 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 IGHV3-74A0A0B4J1X5 117 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 LOC389332A0A1B0GUA5 103 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 LGALS9O00182 355 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 ATP5LO75964 103 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 NDUFA7O95182 113 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 IGHV3-11P01762 117 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 G0S2P27469 103 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 LEPP41159 167 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 ASIPP42127 132 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 BEAN1Q3B7T3 259 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 SPANXN1Q5VSR9 72 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 UNQ9165/PRO28630Q6UXU0 137 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 C12orf54Q6X4T0 127 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 ATOH7Q8N100 152 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 OR2K2Q8NGT1 345 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 FAM19A4Q96LR4 140 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 C20orf78Q9BR46 151 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 KLK15Q9H2R5 256 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 GOLT1BQ9Y3E0 138 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 ATRQ13535 2644 aa4.32□□□□□ -1.72
SDF2-206ENST00000587788 M0R381 172 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 NPYP01303 97 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 TRBV12-3P01733 135 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 COX8AP10176 69 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 S100A4P26447 101 aaKnown RBP4.31□□□□□ -1.72
SDF2-206ENST00000587788 SNRPD3P62318 126 aaKnown RBP4.31□□□□□ -1.72
SDF2-206ENST00000587788 Q6ZSV7 163 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 LINC00173Q6ZV60 143 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 ZFAND2AQ8N6M9 145 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 IFI27L1Q96BM0 104 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
SDF2-206ENST00000587788 SCRT2Q9NQ03 307 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms