RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ALG5Q9Y673 324 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 ZANQ9Y493 2812 aa1.35□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV7-4-1A0A0J9YVY3 117 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 TEX50A0A1B0GTY4 177 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 C9orf170A2RU37 121 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 SAA1P0DJI8 122 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 PTHLHP12272 177 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 IL7P13232 177 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 CRYBB3P26998 211 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 Q6AWC8 147 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM14EPQ6UXP3 125 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 ATP5L2Q7Z4Y8 100 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 FER1L6-AS1Q8NA97 138 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 OR5D18Q8NGL1 313 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 OR10AC1Q8NH08 325 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 WFDC1Q9HC57 220 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 MANBALQ9NQG1 85 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 UQCC1Q9NVA1 299 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 LY96Q9Y6Y9 160 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 TRAV14DV4A0A0A6YYC5 116 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A0U1RQV1 116 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 TINCRA0A1B0GVN0 87 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 WI2-2373I1.2A0A1W2PRP0 233 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM235A6NFC5 223 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 INMT-MINDY4F8WBC2 141 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 HYPMO75409 117 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 TRBV12-3P01733 135 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 HLA-DQA1P01909 254 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 OR4E1P0C645 316 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 DNAH10OSP0CZ25 163 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 RPL12P30050 165 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 RPS10P46783 165 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 ELOBQ15370 118 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 DNLZQ5SXM8 178 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 CYB561D1Q8N8Q1 229 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 OR4C16Q8NGL9 310 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 HYLS1Q96M11 299 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 CHCHD7Q9BUK0 85 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 RPS10P5Q9NQ39 176 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 SMPXQ9UHP9 88 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 HIGD1AQ9Y241 93 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 FREM3P0C091 2139 aa1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 FLNAP21333 2647 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-211ENST00000584897 MGAM2Q2M2H8 2515 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 IGLC7A0M8Q6 106 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM168BA1KXE4 195 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 CCL25O15444 150 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 OR5AC1P0C628 307 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 GNG10P50151 68 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 MP68P56378 58 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 RHOGP84095 191 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 FABP9Q0Z7S8 132 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 Q56UQ5 140 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 C1orf195Q5TG92 126 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 ORMDL3Q8N138 153 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 HIST1H2BAQ96A08 127 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 AQP10Q96PS8 301 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 PSENENQ9NZ42 101 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 HSPB11Q9Y547 144 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 HILPDAQ9Y5L2 63 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAPPC1Q9Y5R8 145 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF706Q9Y5V0 76 aaPredicted RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 SOX21Q9Y651 276 aaPredicted RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 V9GYH0 126 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 NUP214P35658 2090 aaPredicted RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAV1-1A0A0B4J248 108 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 A0A1B0GW64 132 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 OR11H12B2RN74 326 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 KRBOX1C9JBD0 128 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 IFNA10P01566 189 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 RNASE2P10153 161 aaKnown RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 RPS27P42677 84 aaKnown RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 ZNF79Q15937 498 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 LGALS9BQ3B8N2 356 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 PSMG4Q5JS54 123 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 IBA57Q5T440 356 aaKnown RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 FAM162BQ5T6X4 162 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 CEMP1Q6PRD7 247 aaPredicted RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 CYP2G1PQ6ZSU1 146 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 TCTE3Q8IZS6 198 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 VAX2Q9UIW0 290 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 ZFP30Q9Y2G7 519 aa1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 TET2Q6N021 2002 aaPredicted RBP1.34□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAV9-1A0A075B6T8 112 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 TRAV8-1A0A0A6YYK1 113 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 KANTRA0A1W2PQU2 76 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 A0A1W2PRE2 83 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 I3L2K1 104 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 IGHV3-11P01762 117 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 PMP2P02689 132 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 CD3DP04234 171 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 IFNA4P05014 189 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 OR13C7P0DN81 318 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 TPT1P13693 172 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 OR10J1P30954 320 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 DAD1P61803 113 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 NCS1P62166 190 aa1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 IAH1Q2TAA2 248 aaPredicted RBP1.33□□□□□ -2.2
SMCHD1-211ENST00000584897 RNF212Q495C1 297 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms