RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FAT1Q14517 4588 aa11.89□□□□□ -0.51
MKS1-209ENST00000580127 PGPEP1LA6NFU8 196 aa11.88□□□□□ -0.51
MKS1-209ENST00000580127 PIK3CD-AS1Q5SR53 167 aa11.88□□□□□ -0.51
MKS1-209ENST00000580127 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
MKS1-209ENST00000580127 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
MKS1-209ENST00000580127 Q8N976 141 aa11.88□□□□□ -0.51
MKS1-209ENST00000580127 KRTAP29-1A8MX34 341 aaPredicted RBP11.87□□□□□ -0.51
MKS1-209ENST00000580127 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
MKS1-209ENST00000580127 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
MKS1-209ENST00000580127 UPK1BO75841 260 aa11.87□□□□□ -0.51
MKS1-209ENST00000580127 MBP02144 154 aa11.87□□□□□ -0.51
MKS1-209ENST00000580127 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
MKS1-209ENST00000580127 CDC34P49427 236 aaPredicted RBP11.87□□□□□ -0.51
MKS1-209ENST00000580127 RAB2AP61019 212 aa11.87□□□□□ -0.51
MKS1-209ENST00000580127 FLI1Q01543 452 aaPredicted RBP11.87□□□□□ -0.51
MKS1-209ENST00000580127 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
MKS1-209ENST00000580127 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
MKS1-209ENST00000580127 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
MKS1-209ENST00000580127 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
MKS1-209ENST00000580127 PRNTQ86SH4 94 aa11.86□□□□□ -0.51
MKS1-209ENST00000580127 MARVELD1Q9BSK0 173 aa11.86□□□□□ -0.51
MKS1-209ENST00000580127 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
MKS1-209ENST00000580127 EPDR1Q9UM22 224 aa11.86□□□□□ -0.51
MKS1-209ENST00000580127 VPS13BQ7Z7G8 4022 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 DEFA1P59665 94 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 DEFA3P59666 94 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 GAGE1Q13065 139 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 GAGE4Q13068 117 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 GAGE5Q13069 117 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 KCNIP4Q6PIL6 250 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 Q6ZSA8 131 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 CYB561D1Q8N8Q1 229 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
MKS1-209ENST00000580127 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.84□□□□□ -0.51
MKS1-209ENST00000580127 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 LECT2O14960 151 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 GCHFRP30047 84 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 ASIPP42127 132 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 ELOBQ15370 118 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 SERTAD4-AS1Q5TG53 156 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
MKS1-209ENST00000580127 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 RAB24Q969Q5 203 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 WFDC1Q9HC57 220 aa11.84□□□□□ -0.51
MKS1-209ENST00000580127 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
MKS1-209ENST00000580127 CXorf1O96002 111 aa11.83□□□□□ -0.52
MKS1-209ENST00000580127 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
MKS1-209ENST00000580127 SERF2P84101 59 aa11.83□□□□□ -0.52
MKS1-209ENST00000580127 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
MKS1-209ENST00000580127 BAALCQ8WXS3 180 aa11.83□□□□□ -0.52
MKS1-209ENST00000580127 PARLQ9H300 379 aa11.83□□□□□ -0.52
MKS1-209ENST00000580127 MYCBP2O75592 4640 aa11.83□□□□□ -0.52
MKS1-209ENST00000580127 RHODO00212 210 aa11.82□□□□□ -0.52
MKS1-209ENST00000580127 OR2G3Q8NGZ4 309 aa11.82□□□□□ -0.52
MKS1-209ENST00000580127 SUN5Q8TC36 379 aa11.82□□□□□ -0.52
MKS1-209ENST00000580127 ACTR3CQ9C0K3 210 aaPredicted RBP11.82□□□□□ -0.52
MKS1-209ENST00000580127 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
MKS1-209ENST00000580127 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 A0A087WX48 190 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 IFNA7P01567 189 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 IGLV2-11P01706 119 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 WFDC2Q14508 124 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 HSD17B11Q8NBQ5 300 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
MKS1-209ENST00000580127 A0A1W2PRE2 83 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 Q0VG73 95 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 C14orf177Q52M58 125 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 CHAC1Q9BUX1 264 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
MKS1-209ENST00000580127 TNFSF18Q9UNG2 199 aa11.79□□□□□ -0.52
MKS1-209ENST00000580127 B4DEV8 164 aa11.78□□□□□ -0.52
MKS1-209ENST00000580127 Q8N3U1 123 aa11.78□□□□□ -0.52
MKS1-209ENST00000580127 KLK12Q9UKR0 248 aa11.78□□□□□ -0.52
MKS1-209ENST00000580127 IGKV3D-20A0A0C4DH25 116 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 OXTP01178 125 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 ATP6V0CP27449 155 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 NIT1Q86X76 327 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 OR11H4Q8NGC9 324 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 SAMD10Q9BYL1 202 aa11.77□□□□□ -0.53
MKS1-209ENST00000580127 IFITM3Q01628 133 aa11.76□□□□□ -0.53
MKS1-209ENST00000580127 DMRTA1Q5VZB9 504 aa11.76□□□□□ -0.53
MKS1-209ENST00000580127 C14orf178Q8N769 122 aaPredicted RBP11.76□□□□□ -0.53
MKS1-209ENST00000580127 UBE2WQ96B02 151 aa11.76□□□□□ -0.53
MKS1-209ENST00000580127 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
MKS1-209ENST00000580127 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
MKS1-209ENST00000580127 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
MKS1-209ENST00000580127 RPL36AP83881 106 aaKnown RBP11.75□□□□□ -0.53
MKS1-209ENST00000580127 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
MKS1-209ENST00000580127 DNLZQ5SXM8 178 aa11.75□□□□□ -0.53
MKS1-209ENST00000580127 FAM74A4Q5TZK3 123 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms