RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 LINC00482Q8N8I6 264 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM263Q8WUH6 116 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF625Q96I27 306 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 DAZ3Q9NR90 486 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV26-1A0A087WT03 109 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A087WZ39 114 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 KIR2DL5BA0A0G2JN68 375 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 KIR2DL5BA0A0G2JPC4 375 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 NDUFB1O75438 58 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 POU2AF1Q16633 256 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 KIR2DL5AQ8N109 375 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 ORAOV1Q8WV07 137 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 VSIG2Q96IQ7 327 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 SCRT2Q9NQ03 307 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 UBE2D4Q9Y2X8 147 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 MKI67P46013 3256 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 ANK1P16157 1881 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV1-1A0A0B4J248 108 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 NDUFS5O43920 106 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 LINC00614P0C842 121 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 ATXN8Q156A1 80 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 DEFB114Q30KQ6 69 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 Q86TA4 180 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM75Q8N9X5 138 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM141Q96I45 108 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 PSMG3-AS1Q96PY0 264 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM14CQ9P0S9 112 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 DMRT1Q9Y5R6 373 aa2.27□□□□□ -2.05
SMCHD1-203ENST00000577880 ANKRD11Q6UB99 2663 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 D6R8Y8 96 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 FSTL3O95633 263 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKCP01834 107 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 C16orf54Q6UWD8 224 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 NIT1Q86X76 327 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 C11orf53Q8IXP5 236 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 AGMATQ9BSE5 352 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 MAP6D1Q9H9H5 199 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 CENPFP49454 3210 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLV11-55A0A075B6I3 123 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 LGALS9O00182 355 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLV1-47P01700 117 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 NPC2P61916 151 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 TDRG1Q3Y452 100 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 C5orf38Q86SI9 138 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 LYPD6Q86Y78 171 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 OCC1Q8TAD7 63 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 SSBP4Q9BWG4 385 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 ERG28Q9UKR5 140 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 WISP2O76076 250 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 QRFPP83859 136 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 COL5A1-AS1Q5SY13 56 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 C9orf153Q5TBE3 101 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 LHFPL1Q86WI0 220 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 IGFBPL1Q8WX77 278 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 TP53TG1Q9Y2A0 90 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLC7A0M8Q6 106 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 SPATA45Q537H7 98 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 C1orf134Q5TEV5 83 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 C11orf71Q6IPW1 123 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF295-AS1Q8N0V1 137 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 MBD3L1Q8WWY6 194 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 CHAC1Q9BUX1 264 aa2.26□□□□□ -2.05
SMCHD1-203ENST00000577880 CEP295Q9C0D2 2601 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 NYNRINQ9P2P1 1898 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 PGPEP1LA6NFU8 196 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 ODF3BA8MYP8 253 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 CTSGP08311 255 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 H2BFSP57053 126 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 C2orf66Q6UXQ4 117 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF479Q96JC4 524 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 AGPAT4-IT1Q9H0P7 198 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF492Q9P255 531 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 UQCR10Q9UDW1 63 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 RBAKDNA6NC62 111 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 IGHV4-30-4P0DP06 118 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 SPAG11BQ08648 103 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 SPRNQ5BIV9 151 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM131Q92545 1883 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 TRBV7-3A0A075B6L6 115 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 GNRH2O43555 120 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 SRP19P09132 144 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 BOD1L2Q8IYS8 172 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 CHCHD1Q96BP2 118 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 C9orf85Q96MD7 179 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 WWC2-AS2Q96NR7 200 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 PARD6GQ9BYG4 376 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 USP9YO00507 2555 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKV1-6A0A0C4DH72 117 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 FRMD6-AS1P0C7T7 363 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 INAFM2P0DMQ5 153 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 CXCL5P42830 114 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 AMN1Q8IY45 258 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 C9orf62Q8N4C0 152 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 STPG4Q8N801 248 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 DEFB105AQ8NG35 78 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 PRO1933Q9H354 126 aa2.25□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A087X0M5 115 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV4A0A0B4J268 109 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms