RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TMEM70Q9BUB7 260 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 RTL8AQ9BWD3 113 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 COMMD5Q9GZQ3 224 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 TMEM126AQ9H061 195 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 PARP12Q9H0J9 701 aaKnown RBP3.83□□□□□ -1.8
SF3B3-214ENST00000572365 IL36BQ9NZH7 164 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 ZNF257Q9Y2Q1 563 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 R4GMQ9 66 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
SF3B3-214ENST00000572365 LINC01619G3V211 115 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 LY6LH3BQJ8 138 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 BUB1B-PAK6H3BSN5 160 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 CRXO43186 299 aaPredicted RBP3.82□□□□□ -1.8
SF3B3-214ENST00000572365 HSBP1O75506 76 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 IGLV1-51P01701 117 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 GYPBP06028 91 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 RBMY1CP0DJD4 496 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 INAFM2P0DMQ5 153 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 CT45A10P0DMU9 189 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 VDAC1P21796 283 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 PSMB8P28062 276 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 S100A7P31151 101 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 UBE2G1P62253 170 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 CCL20P78556 96 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 LINC01590Q5TEZ4 76 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 LYRM7Q5U5X0 104 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 LINC00336Q6ZUF6 198 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 MOB3BQ86TA1 216 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 TMEM256Q8N2U0 113 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 TTC9CQ8N5M4 171 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 OR10AG1Q8NH19 301 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 C18orf32Q8TCD1 76 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 LSM10Q969L4 123 aaKnown RBP3.82□□□□□ -1.8
SF3B3-214ENST00000572365 GALMQ96C23 342 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 SH3BGRL3Q9H299 93 aa3.82□□□□□ -1.8
SF3B3-214ENST00000572365 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 IGLL5B9A064 214 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 C9JCJ5 164 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 M0R2Z0 102 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 TTRP02766 147 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 C3orf79P0CE67 100 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 HIST1H1EP10412 219 aaKnown RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 ZNF121P58317 390 aaPredicted RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 GRB2P62993 217 aaKnown RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 QRFPP83859 136 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 SMAGPQ0VAQ4 97 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 RTL8BQ17RB0 113 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 TDRG1Q3Y452 100 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 S100A7AQ86SG5 101 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 BOD1L2Q8IYS8 172 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 Q8N9W7 124 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 BLNKQ8WV28 456 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 RPEQ96AT9 228 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 CHCHD1Q96BP2 118 aaKnown RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 TM2D1Q9BX74 207 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 OR2D2Q9H210 308 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 ZNF331Q9NQX6 463 aaPredicted RBP3.81□□□□□ -1.8
SF3B3-214ENST00000572365 TAS2R4Q9NYW5 299 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 ANXA10Q9UJ72 324 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 HSPB8Q9UJY1 196 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 ERG28Q9UKR5 140 aa3.81□□□□□ -1.8
SF3B3-214ENST00000572365 IGLV2-18A0A075B6J9 118 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.8□□□□□ -1.8
SF3B3-214ENST00000572365 A0A1B0GV50 99 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 A0A1B0GW15 77 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 LOC107986453A0A1B0GWG9 222 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 OR2T8A6NH00 312 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 DEFB4AO15263 64 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 XRCC2O43543 280 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 MPDU1O75352 247 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 IGLV1-47P01700 117 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 SMIM13P0DJ93 91 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 MPV17L2Q567V2 206 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 GCSAMLQ5JQS6 135 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 LCN15Q6UWW0 184 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 ZNF439Q8NDP4 499 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 OR10X1Q8NGY0 326 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 ZNF502Q8TBZ5 544 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 OR51E1Q8TCB6 317 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 PP6455Q8WZ26 134 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 ADTRPQ96IZ2 230 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 AMELYQ99218 206 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 RASL11BQ9BPW5 248 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 GGTLC1Q9BX51 225 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 MAP1LC3CQ9BXW4 147 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 TMEM222Q9H0R3 208 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 C11orf1Q9H5F2 150 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 RPRMQ9NS64 109 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
SF3B3-214ENST00000572365 A0A0G2JLM5 398 aa3.79□□□□□ -1.8
SF3B3-214ENST00000572365 C3orf85A0A1B0GTC6 90 aa3.79□□□□□ -1.8
SF3B3-214ENST00000572365 TEX50A0A1B0GTY4 177 aa3.79□□□□□ -1.8
SF3B3-214ENST00000572365 A0A1W2PPM0 123 aa3.79□□□□□ -1.8
SF3B3-214ENST00000572365 FAM24AA6NFZ4 105 aa3.79□□□□□ -1.8
SF3B3-214ENST00000572365 OR4C46A6NHA9 309 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 910.6 ms