RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DCHS2Q6V1P9 2916 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 CSMD1Q96PZ7 3565 aa3.09□□□□□ -1.91
LINC00561-201ENST00000565815 IGHV1-24A0A0C4DH33 117 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 RBP4P02753 201 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 COX8AP10176 69 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 DSCR10P59022 87 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 PLGLAQ15195 96 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 ZNF493Q6ZR52 646 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 LINC00305Q7Z4B0 112 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 FAM19A2Q8N3H0 131 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 OR4X2Q8NGF9 303 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 INSIG2Q9Y5U4 225 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 NBEAL1Q6ZS30 2694 aa3.09□□□□□ -1.92
LINC00561-201ENST00000565815 ANK3Q12955 4377 aaKnown RBP3.09□□□□□ -1.92
LINC00561-201ENST00000565815 IGKV1D-37A0A075B6S9 117 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 A0A1B0GUT8 65 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 PGPA6NDG6 321 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 TAX1BP3O14907 124 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 SCGB2A1O75556 95 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 HLA-DRB4P13762 266 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 GP9P14770 177 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 GNG10P50151 68 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 PDE6HQ13956 83 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 LGALS9BQ3B8N2 356 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 GDF5OSQ5U4N7 250 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 LGALS9CQ6DKI2 356 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 UNQ5815/PRO19632Q6UWF5 114 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 PATE2Q6UY27 113 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 ZNF562Q6V9R5 426 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 Q86TA4 180 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 BPIFA4PQ86YQ2 179 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 OR5A1Q8NGJ0 315 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 KAAG1Q9UBP8 84 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 HIGD1AQ9Y241 93 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 HLA-DRB4X5D2U9 266 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 MED12Q93074 2177 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 H3BRM9 83 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 SPINK4O60575 86 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 LY6HO94772 140 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 IGHV1-46P01743 117 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 SMIM17P0DL12 118 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 HSD52Q0P140 79 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 FA2HQ7L5A8 372 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 KIR3DL3Q8N743 410 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 MRPL20Q9BYC9 149 aaKnown RBP3.08□□□□□ -1.92
LINC00561-201ENST00000565815 Q9H3A6 140 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 U3KQK5 164 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 TLN2Q9Y4G6 2542 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 ANK2Q01484 3957 aa3.08□□□□□ -1.92
LINC00561-201ENST00000565815 IGHV3OR15-7A0A075B7D8 119 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 MOSP00540 346 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 IGLV2-23P01705 113 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 IGKV1-16P04430 117 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 COL8A2P25067 703 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 HTR1DP28221 377 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 RPL27AP46776 148 aaKnown RBP3.07□□□□□ -1.92
LINC00561-201ENST00000565815 SLC35B1P78383 322 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 OCIAD2Q56VL3 154 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 POM121L12Q8N7R1 296 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 GTSF1Q8WW33 167 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 AP1S3Q96PC3 154 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 B9D2Q9BPU9 175 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 CST9LQ9H4G1 147 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 FZR1Q9UM11 496 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 TRAV5A0A0B4J249 113 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 C7orf71A4D174 169 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 NDUFB3O43676 98 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 CRYGBP07316 175 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 PYYP10082 97 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 WT1-ASQ06250 92 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 MPV17L2Q567V2 206 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 LCN12Q6JVE5 192 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 BOD1L2Q8IYS8 172 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 SLC25A39Q9BZJ4 359 aaPredicted RBP3.07□□□□□ -1.92
LINC00561-201ENST00000565815 SMPXQ9UHP9 88 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 RABAC1Q9UI14 185 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 F11RQ9Y624 299 aaKnown RBP3.07□□□□□ -1.92
LINC00561-201ENST00000565815 ARFGEF3Q5TH69 2177 aa3.07□□□□□ -1.92
LINC00561-201ENST00000565815 IGHV3-64DA0A0J9YX35 117 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 LINC01546A6NGU7 62 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 CA1P00915 261 aaPredicted RBP3.06□□□□□ -1.92
LINC00561-201ENST00000565815 SCGB1A1P11684 91 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 GATA1P15976 413 aaPredicted RBP3.06□□□□□ -1.92
LINC00561-201ENST00000565815 TMEM97Q5BJF2 176 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 GTSCR1Q86UQ5 136 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 DEFB108BQ8NET1 73 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 PGLYRP4Q96LB8 373 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 CCL13Q99616 98 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 HIGD1BQ9P298 99 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 DOCK11Q5JSL3 2073 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 H3BRN7 92 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 ZNF207O43670 478 aaKnown RBP3.06□□□□□ -1.92
LINC00561-201ENST00000565815 TFF1P04155 84 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 IGLC1P0CG04 106 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 BMI1P35226 326 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 PSG9Q00887 426 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 MOB3BQ86TA1 216 aa3.06□□□□□ -1.92
LINC00561-201ENST00000565815 ATOH7Q8N100 152 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms