RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 FABP5P3A8MUU1 101 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 PTTG1O95997 202 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 IGHV3-30P01768 117 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 IGHV3-33P01772 117 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 IGHV3-30-3P0DP02 117 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 IGHV3-30-5P0DP03 117 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 ASIPP42127 132 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 TOR2AQ5JU69 321 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 ZNF506Q5JVG8 444 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 SYT8Q8NBV8 401 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 PTH2Q96A98 100 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 C9orf85Q96MD7 179 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 NKX6-2Q9C056 277 aaPredicted RBP6.44□□□□□ -1.38
CLN6-203ENST00000563917 BATF3Q9NR55 127 aa6.44□□□□□ -1.38
CLN6-203ENST00000563917 A0A087WWC5 75 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 SEC11BP0C7V7 166 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 ZNF80P51504 273 aaPredicted RBP6.43□□□□□ -1.38
CLN6-203ENST00000563917 FGF8P55075 233 aaPredicted RBP6.43□□□□□ -1.38
CLN6-203ENST00000563917 XGP55808 180 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 LAGE3Q14657 143 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 PIK3CD-AS1Q5SR53 167 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 AKR1C8PQ5T2L2 129 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 Q5VSD8 79 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 ZFP2Q6ZN57 461 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 SUN5Q8TC36 379 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 URGCP-MRPS24S4R325 110 aa6.43□□□□□ -1.38
CLN6-203ENST00000563917 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 FXYD6-FXYD2A0A087WZ82 144 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 B4DEV8 164 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 GGTLC3B5MD39 225 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 RHODO00212 210 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 GIPP09681 153 aaPredicted RBP6.42□□□□□ -1.38
CLN6-203ENST00000563917 GAGE1Q13065 139 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 GAGE4Q13068 117 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 GAGE5Q13069 117 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 KCNIP4Q6PIL6 250 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 DPPA3Q6W0C5 159 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 Q8N814 137 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 HIST1H2BAQ96A08 127 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 RMI2Q96E14 147 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 TMEM70Q9BUB7 260 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 COX11Q9Y6N1 276 aa6.42□□□□□ -1.38
CLN6-203ENST00000563917 PEX7O00628 323 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 IGLV2-11P01706 119 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
CLN6-203ENST00000563917 RNASE3P12724 160 aaKnown RBP6.41□□□□□ -1.38
CLN6-203ENST00000563917 UBE2G2P60604 165 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 UBE2G1P62253 170 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 RPL7L1Q6DKI1 246 aaKnown RBP6.41□□□□□ -1.38
CLN6-203ENST00000563917 OR2T35Q8NGX2 323 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 STOML3Q8TAV4 291 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 PARLQ9H300 379 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 ARL2-SNX15V9GYD0 113 aa6.41□□□□□ -1.38
CLN6-203ENST00000563917 TRAV34A0A0B4J273 112 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 TPT1P13693 172 aaKnown RBP6.4□□□□□ -1.38
CLN6-203ENST00000563917 Q6ZSN1 163 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 OR11H4Q8NGC9 324 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 LINC00479Q96M42 142 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 IL36BQ9NZH7 164 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 ZFP30Q9Y2G7 519 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 PHLDA3Q9Y5J5 127 aa6.4□□□□□ -1.38
CLN6-203ENST00000563917 IGKV3D-20A0A0C4DH25 116 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 LRCOL1A6NCL2 159 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 H3BVH4 76 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 M0R036 132 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 ELOBQ15370 118 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 FAM162BQ5T6X4 162 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 FAM74A4Q5TZK3 123 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 Q86TA4 180 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.39□□□□□ -1.39
CLN6-203ENST00000563917 FMC1Q96HJ9 113 aa6.39□□□□□ -1.39
CLN6-203ENST00000563917 A0A087WX48 190 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 MAP1LC3B2A6NCE7 125 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 FAM74A7A6NL05 159 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 C1QBP02746 253 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 ARMS2P0C7Q2 107 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 CST9LP1Q5W188 147 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 TCEAL7Q9BRU2 100 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 MAP1LC3BQ9GZQ8 125 aa6.38□□□□□ -1.39
CLN6-203ENST00000563917 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 GRIFINA4D1Z8 144 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 RNF222A6NCQ9 220 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 KRBOX1C9JBD0 128 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 M0R381 172 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 SH2D1AO60880 128 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 AKR1C3P42330 323 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 RPL36AP83881 106 aaKnown RBP6.37□□□□□ -1.39
CLN6-203ENST00000563917 Q5BKY6 102 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 DMRTA1Q5VZB9 504 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
CLN6-203ENST00000563917 RPL36ALQ969Q0 106 aaKnown RBP6.37□□□□□ -1.39
CLN6-203ENST00000563917 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms