RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 C1QBP02746 253 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 S100A4P26447 101 aaKnown RBP8.63□□□□□ -1.03
SF3B3-202ENST00000562722 GAGE1Q13065 139 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 GAGE4Q13068 117 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 GAGE5Q13069 117 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 WFDC2Q14508 124 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 SMUG1Q53HV7 270 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 Q8N3U1 123 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 C9orf85Q96MD7 179 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
SF3B3-202ENST00000562722 FLI1Q01543 452 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-202ENST00000562722 LGALSLQ3ZCW2 172 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-202ENST00000562722 TOR2AQ5JU69 321 aa8.62□□□□□ -1.03
SF3B3-202ENST00000562722 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
SF3B3-202ENST00000562722 HSD17B11Q8NBQ5 300 aa8.62□□□□□ -1.03
SF3B3-202ENST00000562722 MARVELD1Q9BSK0 173 aa8.62□□□□□ -1.03
SF3B3-202ENST00000562722 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
SF3B3-202ENST00000562722 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 STAG3L2P0CL84 134 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 STAG3L3P0CL85 134 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 GCHFRP30047 84 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 IFITM3Q01628 133 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
SF3B3-202ENST00000562722 CYB561D1Q8N8Q1 229 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 OR2T35Q8NGX2 323 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 RAB24Q969Q5 203 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 PTH2Q96A98 100 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 PARLQ9H300 379 aa8.61□□□□□ -1.03
SF3B3-202ENST00000562722 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
SF3B3-202ENST00000562722 A8MWV9 139 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
SF3B3-202ENST00000562722 DEFA1P59665 94 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 DEFA3P59666 94 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
SF3B3-202ENST00000562722 SAPCD1Q5SSQ6 148 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 BAALCQ8WXS3 180 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 EPDR1Q9UM22 224 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 URGCP-MRPS24S4R325 110 aa8.6□□□□□ -1.03
SF3B3-202ENST00000562722 A0A087WWC5 75 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 IGLV2-11P01706 119 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 ASIPP42127 132 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 OR2G3Q8NGZ4 309 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 RMI2Q96E14 147 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 TMEM167BQ9NRX6 74 aa8.59□□□□□ -1.03
SF3B3-202ENST00000562722 RBFOX3A6NFN3 312 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 CXorf1O96002 111 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 IFNA7P01567 189 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 MBP02144 154 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 FGF8P55075 233 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-202ENST00000562722 Q6ZSA8 131 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 COX11Q9Y6N1 276 aa8.58□□□□□ -1.04
SF3B3-202ENST00000562722 IGKV2D-24A0A075B6R9 120 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 TRAV34A0A0B4J273 112 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 IGKV3D-20A0A0C4DH25 116 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 ATP6V0CP27449 155 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 KCNIP4Q6PIL6 250 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-202ENST00000562722 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 SUN5Q8TC36 379 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 PSMG3Q9BT73 122 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-202ENST00000562722 SAMD10Q9BYL1 202 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 ACTR3CQ9C0K3 210 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-202ENST00000562722 JPT2Q9H910 190 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 ARL2-SNX15V9GYD0 113 aa8.57□□□□□ -1.04
SF3B3-202ENST00000562722 FABP5P3A8MUU1 101 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 B4DEV8 164 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 H3BVH4 76 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 SEC11BP0C7V7 166 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 FAM74A4Q5TZK3 123 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 Q8N976 141 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 Q9UF83 564 aa8.56□□□□□ -1.04
SF3B3-202ENST00000562722 KRTAP29-1A8MX34 341 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-202ENST00000562722 RHODO00212 210 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 UBE2G2P60604 165 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 SERF2P84101 59 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 OR11H4Q8NGC9 324 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 IL36BQ9NZH7 164 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 KLK12Q9UKR0 248 aa8.55□□□□□ -1.04
SF3B3-202ENST00000562722 A0A087WX48 190 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 A0A1W2PRE2 83 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 GRIFINA4D1Z8 144 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 M0R036 132 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 NIT1Q86X76 327 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 TNFSF18Q9UNG2 199 aa8.54□□□□□ -1.04
SF3B3-202ENST00000562722 A0A087WWL8 130 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 PEX7O00628 323 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 ARMS2P0C7Q2 107 aa8.53□□□□□ -1.04
SF3B3-202ENST00000562722 ELOBQ15370 118 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms