RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 DERL1Q9BUN8 251 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF436Q9C0F3 470 aaPredicted RBP2.84□□□□□ -1.95
LRRC28-222ENST00000561431 CCL28Q9NRJ3 127 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 KAAG1Q9UBP8 84 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 OR5V1Q9UGF6 321 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 ZNF222Q9UK12 451 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 FUT9Q9Y231 359 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 TMEM14AQ9Y6G1 99 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 R4GMQ9 66 aa2.84□□□□□ -1.95
LRRC28-222ENST00000561431 NBEAL1Q6ZS30 2694 aa2.84□□□□□ -1.96
LRRC28-222ENST00000561431 IGKV1D-17A0A075B6S4 117 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 TRAV40A0A0B4J280 105 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 MDFIC2A0A1B0GVS7 189 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 LOC107986453A0A1B0GWG9 222 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 B4DEV8 164 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 C9JQL5 133 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 COX7A2LO14548 114 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 IGLV2-8P01709 118 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 HLA-DQB1P01920 261 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 GIG44P09565 113 aaPredicted RBP2.83□□□□□ -1.96
LRRC28-222ENST00000561431 SDC2P34741 201 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 INSL3P51460 131 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 TMEM258P61165 79 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 FGF12P61328 243 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 UBA52P62987 128 aaKnown RBP2.83□□□□□ -1.96
LRRC28-222ENST00000561431 QRFPP83859 136 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 RBMY1FQ15415 496 aaKnown RBP2.83□□□□□ -1.96
LRRC28-222ENST00000561431 MEIG1Q5JSS6 88 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 CASC10Q5T4H9 136 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF880Q6PDB4 577 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 SLC25A34Q6PIV7 304 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 BRD3OSQ6XYD6 125 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF429Q86V71 674 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 C3orf22Q8N5N4 141 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 TEX29Q8N6K0 151 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 FAM216BQ8N7L0 139 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 Q8N7P7 452 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 SIGLECL1Q8N7X8 197 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF709Q8N972 641 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF555Q8NEP9 628 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 SGMS2Q8NHU3 365 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 AQP3Q92482 292 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 SLC25A46Q96AG3 418 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 ABHD14BQ96IU4 210 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 GAFA1Q96PS6 74 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 NAA38Q9BRA0 125 aaKnown RBP2.83□□□□□ -1.96
LRRC28-222ENST00000561431 MIEN1Q9BRT3 115 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 DUSP21Q9H596 190 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
LRRC28-222ENST00000561431 TRBV20OR9-2A0A075B6H5 130 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 TRAV41A0A0B4J266 112 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 IGHV1-58A0A0C4DH39 117 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 IGKV1-9A0A0C4DH69 117 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 A6NIN4 97 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 ZFP92A6NM28 416 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 KRTAP4-16G5E9R7 235 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-222ENST00000561431 UBE2L6O14933 153 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF73O43830 326 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-222ENST00000561431 LTAP01374 205 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 HSPB1P04792 205 aaKnown RBP2.82□□□□□ -1.96
LRRC28-222ENST00000561431 LINC00869P0C866 280 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 P0C879 139 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 CHTF8P0CG12 524 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 CRISP2P16562 243 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 COX7A1P24310 79 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF93P35789 620 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-222ENST00000561431 CAV3P56539 151 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 GABARAPL2P60520 117 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 LYZP61626 148 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 EGFEM1PQ0D2K5 195 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 RRN3P1Q2M238 152 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 ORMDL2Q53FV1 153 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 HCP5Q6MZN7 132 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 LCA10Q71F78 164 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 C10orf126Q8N4M7 172 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 RPP25LQ8N5L8 163 aaKnown RBP2.82□□□□□ -1.96
LRRC28-222ENST00000561431 OR2T10Q8NGZ9 312 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 PRO1933Q9H354 126 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 TUBA4BQ9H853 241 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF492Q9P255 531 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 PKD1L1Q8TDX9 2849 aa2.82□□□□□ -1.96
LRRC28-222ENST00000561431 FAM236AA0A1B0GUQ0 79 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 FAM236BA0A1B0GV22 79 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 H3BSH0 61 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 NDUFB3O43676 98 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 ZNF737O75373 536 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 IGHV1-69P01742 117 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 CTSDP07339 412 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-222ENST00000561431 OR5AC1P0C628 307 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 NFYBP25208 207 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 AQP4P55087 323 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 FOXA3P55318 350 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-222ENST00000561431 PRB3Q04118 309 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-222ENST00000561431 REG3AQ06141 175 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 KLRD1Q13241 179 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 DIAPH2-AS1Q14236 149 aa2.81□□□□□ -1.96
LRRC28-222ENST00000561431 TMEM183BQ1AE95 376 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms