RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 H7BYZ3 331 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 CORTO00230 105 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 UPK2O00526 184 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 ARPC5O15511 151 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 CRXO43186 299 aaPredicted RBP1.71□□□□□ -2.14
LRRC28-218ENST00000560236 SIX6O95475 246 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 MT-CO2P00403 227 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 HPRT1P00492 218 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 IGKV1-17P01599 117 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 CD3DP04234 171 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 OR4E1P0C645 316 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 SMIM6P0DI80 62 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 PTHLHP12272 177 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 NQO2P16083 231 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 TBPP20226 339 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 SRIP30626 198 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 CLDN12P56749 244 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 TAS2R19P59542 299 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 WT1-ASQ06250 92 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 DNLZQ5SXM8 178 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 HES5Q5TA89 166 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 ALKAL2Q6UX46 152 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 C6orf201Q7Z4U5 140 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 LHFPL1Q86WI0 220 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 TMEM17Q86X19 198 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 C12orf45Q8N5I9 185 aaPredicted RBP1.71□□□□□ -2.14
LRRC28-218ENST00000560236 BPIFCQ8NFQ6 507 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 OR10W1Q8NGF6 305 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 OR51S1Q8NGJ8 323 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 OR1L8Q8NGR8 309 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 GLYATL2Q8WU03 294 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 FAM3DQ96BQ1 224 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 RMI2Q96E14 147 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 SMIM8Q96KF7 97 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 YPEL4Q96NS1 127 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 AQP10Q96PS8 301 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 GINS4Q9BRT9 223 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 SPXQ9BT56 116 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 SEC11CQ9BY50 192 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 NMES1Q9C002 83 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 NKX6-2Q9C056 277 aaPredicted RBP1.71□□□□□ -2.14
LRRC28-218ENST00000560236 ARL6Q9H0F7 186 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 BANF2Q9H503 90 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 NDUFA4L2Q9NRX3 87 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 FKBP11Q9NYL4 201 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 TAS2R4Q9NYW5 299 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 CKLFQ9UBR5 152 aa1.71□□□□□ -2.14
LRRC28-218ENST00000560236 IGLV4-60A0A075B6I1 120 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 FXYD6-FXYD2A0A087WZ82 144 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 TRAV8-6A0A0B4J262 113 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 IGKV1-6A0A0C4DH72 117 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 C9orf170A2RU37 121 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 F8W036 122 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 H7C1H1 209 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 GPR31O00270 319 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 ISLRO14498 428 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 GOSR2O14653 212 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 RBFOX2O43251 390 aaKnown RBP eCLIP1.7□□□□□ -2.14
LRRC28-218ENST00000560236 SSX5O60225 188 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 PITX3O75364 302 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 RAB3DO95716 219 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 APOC3P02656 99 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 ORM1P02763 201 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 S100A8P05109 93 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 PRSS3P35030 304 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 CRYBA4P53673 196 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 CNBPP62633 177 aaKnown RBP1.7□□□□□ -2.14
LRRC28-218ENST00000560236 SUPT4H1P63272 117 aaKnown RBP1.7□□□□□ -2.14
LRRC28-218ENST00000560236 CIRBPQ14011 172 aaKnown RBP1.7□□□□□ -2.14
LRRC28-218ENST00000560236 WFDC2Q14508 124 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 MSMO1Q15800 293 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 RAB11BQ15907 218 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 FAM74A1Q5RGS3 127 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 PRSS54Q6PEW0 395 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 AMTNQ6UX39 209 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 ZNF546Q86UE3 836 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 BAP18Q8IXM2 172 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 SVBPQ8N300 66 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 JAGN1Q8N5M9 183 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 LINC00469Q8N7U9 141 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 C9orf163Q8N9P6 203 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 OR1S2Q8NGQ3 325 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 Q8WTZ3 238 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 SFT2D1Q8WV19 159 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 PPP1R1CQ8WVI7 109 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 PRRT1Q99946 306 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 CMSS1Q9BQ75 279 aaKnown RBP1.7□□□□□ -2.14
LRRC28-218ENST00000560236 TXNDC17Q9BRA2 123 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 MRPL32Q9BYC8 188 aaKnown RBP1.7□□□□□ -2.14
LRRC28-218ENST00000560236 FXYD6Q9H0Q3 95 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 SH3BGRL3Q9H299 93 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 C11orf1Q9H5F2 150 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 BIN3Q9NQY0 253 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 UQCC1Q9NVA1 299 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 CACFD1Q9UGQ2 172 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 HHLA3Q9XRX5 114 aa1.7□□□□□ -2.14
LRRC28-218ENST00000560236 TRGV2A0A075B6R0 118 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 KANTRA0A1W2PQU2 76 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 LINC00587B1AMM8 73 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 DISC1C4P0D8 188 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms