RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 CD7P09564 240 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 FAM162BQ5T6X4 162 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 WFDC9Q8NEX5 89 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 RCHY1Q96PM5 261 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 KLLNB2CW77 178 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 H3BMM0 161 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 HLA-DRB4P13762 266 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 C3orf56Q8N813 242 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
RABGGTA-209ENST00000559551 K7EP13 123 aa10.55□□□□□ -0.72
RABGGTA-209ENST00000559551 TSPOP30536 169 aa10.55□□□□□ -0.72
RABGGTA-209ENST00000559551 UBE2V1Q13404 147 aa10.55□□□□□ -0.72
RABGGTA-209ENST00000559551 EBLN2Q6P2I7 272 aa10.55□□□□□ -0.72
RABGGTA-209ENST00000559551 TMEM158Q8WZ71 300 aa10.55□□□□□ -0.72
RABGGTA-209ENST00000559551 COX11Q9Y6N1 276 aa10.55□□□□□ -0.72
RABGGTA-209ENST00000559551 IGKV3D-20A0A0C4DH25 116 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 M0R2Z0 102 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 KIAA1644Q3SXP7 199 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 CT83Q5H943 113 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 FABP5P3A8MUU1 101 aa10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 MRPL54Q6P161 138 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-209ENST00000559551 TMSB15BA0A087X1C1 80 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 CCL25O15444 150 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 SPINK4O60575 86 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 TRAV12-2A0A075B6T6 113 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 IGLL1P15814 213 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 NTF3P20783 257 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 RNASE4P34096 147 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 FXYD7P58549 80 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 SPINK13Q1W4C9 94 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 Q6AWC8 147 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 C18orf32Q8TCD1 76 aa10.53□□□□□ -0.72
RABGGTA-209ENST00000559551 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
RABGGTA-209ENST00000559551 CRXO43186 299 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-209ENST00000559551 RBX1P62877 108 aa10.52□□□□□ -0.73
RABGGTA-209ENST00000559551 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
RABGGTA-209ENST00000559551 MUC4Q99102 2169 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 TMEM189A5PLL7 270 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 A8MWL6 223 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 HSBP1O75506 76 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 RBMY1A1P0DJD3 496 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 RBMY1CP0DJD4 496 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 CDKN1BP46527 198 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 HINT1P49773 126 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 INSL3P51460 131 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 COTL1Q14019 142 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
RABGGTA-209ENST00000559551 WIPF1O43516 503 aa10.5□□□□□ -0.73
RABGGTA-209ENST00000559551 ORM1P02763 201 aa10.5□□□□□ -0.73
RABGGTA-209ENST00000559551 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
RABGGTA-209ENST00000559551 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
RABGGTA-209ENST00000559551 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
RABGGTA-209ENST00000559551 DNAH3Q8TD57 4116 aa10.5□□□□□ -0.73
RABGGTA-209ENST00000559551 TRAV12-3A0A0B4J271 114 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 SLAQ13239 276 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 PGLYRP4Q96LB8 373 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 FAM110AQ9BQ89 295 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 ALKBH7Q9BT30 221 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 C7orf71A4D174 169 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 LEPP41159 167 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 RPS20P60866 119 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 ATP5L2Q7Z4Y8 100 aa10.49□□□□□ -0.73
RABGGTA-209ENST00000559551 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 ANXA2RQ3ZCQ2 193 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 PRR31Q5SQ13 230 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 CLUHP3Q96NS8 147 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
RABGGTA-209ENST00000559551 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-209ENST00000559551 DEFB125Q8N687 156 aa10.47□□□□□ -0.73
RABGGTA-209ENST00000559551 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 ARMS2P0C7Q2 107 aa10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 LYZL1Q6UWQ5 148 aa10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 MCRIP2Q9BUT9 160 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-209ENST00000559551 GNRH2O43555 120 aa10.46□□□□□ -0.74
RABGGTA-209ENST00000559551 SPRY2O43597 315 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms