RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 A0A0J9YY99 117 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 K7EN84 100 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 ARMS2P0C7Q2 107 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 DNLZQ5SXM8 178 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 POM121L12Q8N7R1 296 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 OCC1Q8TAD7 63 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 DAZAP1Q96EP5 407 aaKnown RBP12.26□□□□□ -0.45
SHMT2-225ENST00000556798 ZNF479Q96JC4 524 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 SMIM7Q9BQ49 75 aa12.26□□□□□ -0.45
SHMT2-225ENST00000556798 NDUFS6O75380 124 aaKnown RBP12.25□□□□□ -0.45
SHMT2-225ENST00000556798 LY6G6CO95867 125 aa12.25□□□□□ -0.45
SHMT2-225ENST00000556798 TRAV4A0A0B4J268 109 aa12.24□□□□□ -0.45
SHMT2-225ENST00000556798 ZNF727A8MUV8 499 aa12.24□□□□□ -0.45
SHMT2-225ENST00000556798 PEA15Q15121 130 aa12.24□□□□□ -0.45
SHMT2-225ENST00000556798 OR4C5Q8NGB2 326 aa12.24□□□□□ -0.45
SHMT2-225ENST00000556798 BIN3Q9NQY0 253 aa12.24□□□□□ -0.45
SHMT2-225ENST00000556798 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
SHMT2-225ENST00000556798 NUDT3O95989 172 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 P01737 135 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 GZMBP10144 247 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 FHL2Q14192 279 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 RNASE7Q9H1E1 156 aaKnown RBP12.23□□□□□ -0.45
SHMT2-225ENST00000556798 SCRT2Q9NQ03 307 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 PHLDA3Q9Y5J5 127 aa12.23□□□□□ -0.45
SHMT2-225ENST00000556798 TRGV4A0A0C4DH28 118 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 M0R381 172 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 CXCL1P09341 107 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 PTH2Q96A98 100 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
SHMT2-225ENST00000556798 IGHV3-73A0A0B4J1V6 119 aa12.21□□□□□ -0.45
SHMT2-225ENST00000556798 RS1O15537 224 aa12.21□□□□□ -0.45
SHMT2-225ENST00000556798 SYT8Q8NBV8 401 aa12.21□□□□□ -0.45
SHMT2-225ENST00000556798 VSIG2Q96IQ7 327 aa12.21□□□□□ -0.45
SHMT2-225ENST00000556798 JPT2Q9H910 190 aa12.21□□□□□ -0.45
SHMT2-225ENST00000556798 HYDINQ4G0P3 5121 aa12.21□□□□□ -0.46
SHMT2-225ENST00000556798 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 MED14OSP0DP75 135 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 CRYBA4P53673 196 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 LINC01551Q86U37 167 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 OR10AG1Q8NH19 301 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 HHLA3Q9XRX5 114 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 RYR2Q92736 4967 aa12.2□□□□□ -0.46
SHMT2-225ENST00000556798 PAX4O43316 350 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 RPS20P60866 119 aaKnown RBP12.19□□□□□ -0.46
SHMT2-225ENST00000556798 SSTP61278 116 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 ZFP82Q8N141 532 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 RPP21Q9H633 154 aaKnown RBP12.19□□□□□ -0.46
SHMT2-225ENST00000556798 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 LY96Q9Y6Y9 160 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 RYR3Q15413 4870 aa12.19□□□□□ -0.46
SHMT2-225ENST00000556798 A8MWV9 139 aa12.18□□□□□ -0.46
SHMT2-225ENST00000556798 SNAI2O43623 268 aa12.18□□□□□ -0.46
SHMT2-225ENST00000556798 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
SHMT2-225ENST00000556798 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
SHMT2-225ENST00000556798 SSBP4Q9BWG4 385 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-225ENST00000556798 SAMD10Q9BYL1 202 aa12.18□□□□□ -0.46
SHMT2-225ENST00000556798 H3BNG1 76 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 IGLC6P0CF74 106 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 P0DMU3 169 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 ERVFC1-1P60608 527 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 FAM74A3Q4VXF1 159 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 FER1L6-AS1Q8NA97 138 aa12.17□□□□□ -0.46
SHMT2-225ENST00000556798 A0A096LPF7 62 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
SHMT2-225ENST00000556798 NXPH4O95158 308 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-225ENST00000556798 SLAQ13239 276 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 TMEM241Q24JQ0 296 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 SOHLH1Q5JUK2 328 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 FAM74A4Q5TZK3 123 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 FAM231DQ6ZW35 169 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
SHMT2-225ENST00000556798 A0A087WWL8 130 aa12.15□□□□□ -0.46
SHMT2-225ENST00000556798 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
SHMT2-225ENST00000556798 ADIRFQ15847 76 aa12.15□□□□□ -0.46
SHMT2-225ENST00000556798 SPANXN1Q5VSR9 72 aa12.15□□□□□ -0.46
SHMT2-225ENST00000556798 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
SHMT2-225ENST00000556798 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
SHMT2-225ENST00000556798 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
SHMT2-225ENST00000556798 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
SHMT2-225ENST00000556798 GYPEP15421 78 aa12.14□□□□□ -0.47
SHMT2-225ENST00000556798 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
SHMT2-225ENST00000556798 UFSP1Q6NVU6 142 aa12.13□□□□□ -0.47
SHMT2-225ENST00000556798 LYZL1Q6UWQ5 148 aa12.13□□□□□ -0.47
SHMT2-225ENST00000556798 ZFP2Q6ZN57 461 aa12.13□□□□□ -0.47
SHMT2-225ENST00000556798 Q6ZSN1 163 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms