RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 SRSF1Q07955 248 aaKnown RBP eCLIP13□□□□□ -0.33
PPP4R3A-208ENST00000555462 ANXA2RQ3ZCQ2 193 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 BPESC1Q9GZL8 116 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 ODF3BA8MYP8 253 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 SIVA1O15304 175 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 DUSP14O95147 198 aaKnown RBP13□□□□□ -0.33
PPP4R3A-208ENST00000555462 TCF15Q12870 199 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 LINC01559Q495D7 138 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 PRADC1Q9BSG0 188 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
PPP4R3A-208ENST00000555462 A0A087WX48 190 aa12.99□□□□□ -0.33
PPP4R3A-208ENST00000555462 GAGE13Q4V321 117 aa12.99□□□□□ -0.33
PPP4R3A-208ENST00000555462 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
PPP4R3A-208ENST00000555462 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
PPP4R3A-208ENST00000555462 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3A-208ENST00000555462 ATP5LO75964 103 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 C2orf66Q6UXQ4 117 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 MXRA5Q9NR99 2828 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 Q6ZS46 218 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 RASL10AQ92737 203 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 SIGMAR1Q99720 223 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 SPANXB1Q9NS25 103 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3A-208ENST00000555462 SMIM2Q9BVW6 85 aa12.97□□□□□ -0.33
PPP4R3A-208ENST00000555462 SCGB2A1O75556 95 aa12.97□□□□□ -0.33
PPP4R3A-208ENST00000555462 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
PPP4R3A-208ENST00000555462 SUMO2P61956 95 aaKnown RBP12.96□□□□□ -0.33
PPP4R3A-208ENST00000555462 TMEM170BQ5T4T1 132 aa12.96□□□□□ -0.33
PPP4R3A-208ENST00000555462 SRSF8Q9BRL6 282 aaKnown RBP12.96□□□□□ -0.33
PPP4R3A-208ENST00000555462 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
PPP4R3A-208ENST00000555462 IGF2-ASQ6U949 168 aa12.96□□□□□ -0.33
PPP4R3A-208ENST00000555462 PKD1L2Q7Z442 2459 aa12.96□□□□□ -0.33
PPP4R3A-208ENST00000555462 E9PLD3 99 aa12.96□□□□□ -0.34
PPP4R3A-208ENST00000555462 PF4V1P10720 104 aa12.96□□□□□ -0.34
PPP4R3A-208ENST00000555462 TMEM95Q3KNT9 176 aa12.96□□□□□ -0.34
PPP4R3A-208ENST00000555462 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
PPP4R3A-208ENST00000555462 LGALS1P09382 135 aaKnown RBP12.95□□□□□ -0.34
PPP4R3A-208ENST00000555462 RAX2Q96IS3 184 aa12.95□□□□□ -0.34
PPP4R3A-208ENST00000555462 ADARB2-AS1A8MUL3 147 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 F8VRH5 84 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 H7C1H1 209 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 HOXA3O43365 443 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 MYMXA0A1B0GTQ4 84 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 PRM2P04554 102 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 TM2D2Q9BX73 214 aa12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 BEX4Q9NWD9 120 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3A-208ENST00000555462 IGHV3-73A0A0B4J1V6 119 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 LY6DQ14210 128 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 Q8N6K4 173 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 FAM110DQ8TAY7 271 aaPredicted RBP12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 BAALCQ8WXS3 180 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 BLCAPP62952 87 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 RRN3P1Q2M238 152 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 PIEZO1Q92508 2521 aa12.93□□□□□ -0.34
PPP4R3A-208ENST00000555462 M0R1W7 72 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 DUX5Q96PT3 197 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 PSMG3-AS1Q96PY0 264 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 CNFNQ9BYD5 112 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 RNASE13Q5GAN3 156 aaKnown RBP12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 SYT8Q8NBV8 401 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 SPOCK3Q9BQ16 436 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 FN1P02751 2386 aaKnown RBP12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 SCGB1C2P0DMR2 95 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 NPC2P61916 151 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 OR10J6PQ8NGY7 276 aa12.92□□□□□ -0.34
PPP4R3A-208ENST00000555462 C11orf86A6NJI1 115 aa12.91□□□□□ -0.34
PPP4R3A-208ENST00000555462 MORN3Q6PF18 240 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3A-208ENST00000555462 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
PPP4R3A-208ENST00000555462 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
PPP4R3A-208ENST00000555462 HIGD1BQ9P298 99 aa12.91□□□□□ -0.34
PPP4R3A-208ENST00000555462 ASIPP42127 132 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 KIR2DL4Q99706 377 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 ZNF580Q9UK33 172 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 MTORP42345 2549 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 TRAV41A0A0B4J266 112 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 NDUFS8O00217 210 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 C10orf99Q6UWK7 81 aa12.9□□□□□ -0.34
PPP4R3A-208ENST00000555462 TRBV7-3A0A075B6L6 115 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 CENPVL3A0A0U1RRI6 287 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 CD7P09564 240 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 PLNP26678 52 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 ZFAND2AQ8N6M9 145 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 SIRPDQ9H106 197 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 KLK9Q9UKQ9 250 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 TEX15Q9BXT5 2789 aa12.89□□□□□ -0.35
PPP4R3A-208ENST00000555462 NFE4Q86UQ8 179 aa12.88□□□□□ -0.35
PPP4R3A-208ENST00000555462 GPHB5Q86YW7 130 aa12.88□□□□□ -0.35
PPP4R3A-208ENST00000555462 ZNF688P0C7X2 276 aa12.88□□□□□ -0.35
PPP4R3A-208ENST00000555462 AJUBAQ96IF1 538 aa12.88□□□□□ -0.35
PPP4R3A-208ENST00000555462 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
PPP4R3A-208ENST00000555462 TSPEAR-AS2P59090 65 aa12.88□□□□□ -0.35
PPP4R3A-208ENST00000555462 NPFFO15130 113 aa12.87□□□□□ -0.35
PPP4R3A-208ENST00000555462 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
PPP4R3A-208ENST00000555462 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-208ENST00000555462 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms