RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SCRT2Q9NQ03 307 aa4.43□□□□□ -1.7
FOXN3-205ENST00000553904 IL36BQ9NZH7 164 aa4.43□□□□□ -1.7
FOXN3-205ENST00000553904 ARL2-SNX15V9GYD0 113 aa4.43□□□□□ -1.7
FOXN3-205ENST00000553904 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
FOXN3-205ENST00000553904 NACAE9PAV3 2078 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 IGHV3-73A0A0B4J1V6 119 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 TRAV34A0A0B4J273 112 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 A0A0D9SG52 128 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 MAP1LC3B2A6NCE7 125 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 RNF222A6NCQ9 220 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 FAM74A7A6NL05 159 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 B4DEV8 164 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 TEX46H3BTG2 121 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 RHODO00212 210 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 PEX7O00628 323 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 ARPC5O15511 151 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 RNASE3P12724 160 aaKnown RBP4.42□□□□□ -1.7
FOXN3-205ENST00000553904 TPT1P13693 172 aaKnown RBP4.42□□□□□ -1.7
FOXN3-205ENST00000553904 KRTAP10-2P60368 255 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 UBE2G2P60604 165 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 ZNF506Q5JVG8 444 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 DNLZQ5SXM8 178 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 FAM162BQ5T6X4 162 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 KCNIP4Q6PIL6 250 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 COX8CQ7Z4L0 72 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 MAP1LC3BQ9GZQ8 125 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 PHLDA3Q9Y5J5 127 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 TNFRSF18Q9Y5U5 241 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 URGCP-MRPS24S4R325 110 aa4.42□□□□□ -1.7
FOXN3-205ENST00000553904 IGKV3D-20A0A0C4DH25 116 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 TRBV6-1A0A0K0K1D8 114 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 LOC100131303A0A0U1RQF7 123 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 KANTRA0A1W2PQU2 76 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 HMSDA8MTL9 139 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 PFDN1O60925 122 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 ARMS2P0C7Q2 107 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 GCSHP23434 173 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 ZNF345Q14585 488 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 LAGE3Q14657 143 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 ELOBQ15370 118 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 ZNF726P1Q15940 193 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 EIF5AL1Q6IS14 154 aaKnown RBP4.41□□□□□ -1.7
FOXN3-205ENST00000553904 DPPA3Q6W0C5 159 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 OR11H4Q8NGC9 324 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 NTN5Q8WTR8 489 aaPredicted RBP4.41□□□□□ -1.7
FOXN3-205ENST00000553904 SFT2D1Q8WV19 159 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 RMI2Q96E14 147 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 C11orf21Q9P2W6 132 aa4.41□□□□□ -1.7
FOXN3-205ENST00000553904 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
FOXN3-205ENST00000553904 HYDINQ4G0P3 5121 aa4.4□□□□□ -1.7
FOXN3-205ENST00000553904 GAGE12JA6NER3 117 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 EPM2AB3EWF7 344 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 KRBOX1C9JBD0 128 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 H2AFB1P0C5Y9 115 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 AKR1C3P42330 323 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 GAGE1Q13065 139 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 GAGE4Q13068 117 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 GAGE5Q13069 117 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 ZNF674Q2M3X9 581 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 GAGE13Q4V321 117 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 DMRTA1Q5VZB9 504 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 ZFP82Q8N141 532 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 KCNRGQ8N5I3 272 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 FRZBQ92765 325 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 PARLQ9H300 379 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 EPPK1P58107 5090 aaKnown RBP4.4□□□□□ -1.71
FOXN3-205ENST00000553904 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.71
FOXN3-205ENST00000553904 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 TRBV10-1A0A0K0K1A3 114 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 FAM229AH3BQW9 127 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 M0R036 132 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 PAGE4O60829 102 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 SH2D1AO60880 128 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 LTAP01374 205 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 IGHV3-30P01768 117 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 IGHV3-33P01772 117 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 IGHV3-30-3P0DP02 117 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 IGHV3-30-5P0DP03 117 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 RPL36AP83881 106 aaKnown RBP4.39□□□□□ -1.71
FOXN3-205ENST00000553904 FAM74A4Q5TZK3 123 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 TMUB2Q71RG4 321 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 Q86TA4 180 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 BAGE2Q86Y30 109 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 FAM213BQ8TBF2 198 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 MBD3L1Q8WWY6 194 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 RPL36ALQ969Q0 106 aaKnown RBP4.39□□□□□ -1.71
FOXN3-205ENST00000553904 ZC2HC1AQ96GY0 325 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 SFRP2Q96HF1 295 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 ZNF471Q9BX82 626 aaPredicted RBP4.39□□□□□ -1.71
FOXN3-205ENST00000553904 Q9HAA7 133 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 CYTL1Q9NRR1 136 aa4.39□□□□□ -1.71
FOXN3-205ENST00000553904 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 A0A087WX48 190 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 GRIFINA4D1Z8 144 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 H3BVH4 76 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 M0R381 172 aa4.38□□□□□ -1.71
FOXN3-205ENST00000553904 C1QBP02746 253 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms