RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 LRCOL1A6NCL2 159 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 LEUTXA8MZ59 168 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 B4DEV8 164 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 ISLRO14498 428 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 PTHLHP12272 177 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 HIST1H1DP16402 221 aaKnown RBP3.09□□□□□ -1.91
CPSF6-206ENST00000550987 ATP6V0CP27449 155 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 RAB5CP51148 216 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 GABARAPL2P60520 117 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 COL5A1-AS1Q5SY13 56 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 GTF2H5Q6ZYL4 71 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 LRP11Q86VZ4 500 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 AMN1Q8IY45 258 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 SLC22A24Q8N4F4 322 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 TMEM75Q8N9X5 138 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 OR4S1Q8NGB4 309 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 MRPL30Q8TCC3 161 aaKnown RBP3.09□□□□□ -1.91
CPSF6-206ENST00000550987 RPS4Y2Q8TD47 263 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 HIST1H2BAQ96A08 127 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 IGF2BP2-AS1Q96M15 143 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 SLC25A21Q9BQT8 299 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-206ENST00000550987 SCRT1Q9BWW7 348 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 METTL1Q9UBP6 276 aaKnown RBP3.09□□□□□ -1.91
CPSF6-206ENST00000550987 TRAPPC1Q9Y5R8 145 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 SOX21Q9Y651 276 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-206ENST00000550987 V9GYS6 101 aa3.09□□□□□ -1.91
CPSF6-206ENST00000550987 KIAA2026Q5HYC2 2103 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 TRAV9-1A0A075B6T8 112 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 ARRDC5A6NEK1 342 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 C16orf90A8MZG2 172 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 IGLL5B9A064 214 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 RPS11P62280 158 aaKnown RBP eCLIP3.08□□□□□ -1.92
CPSF6-206ENST00000550987 MOBPQ13875 183 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 RTL8BQ17RB0 113 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 ZNF181Q2M3W8 571 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 LDLRAD2Q5SZI1 272 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 EXOC3-AS1Q8N2X6 119 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 OR4C16Q8NGL9 310 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 SLC25A40Q8TBP6 338 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 KLF14Q8TD94 323 aaPredicted RBP3.08□□□□□ -1.92
CPSF6-206ENST00000550987 ABHD14BQ96IU4 210 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 CCL13Q99616 98 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 TMEM191AQ9H0A3 160 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 Q9H521 79 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 TNFSF18Q9UNG2 199 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 RNF11Q9Y3C5 154 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 DOCK11Q5JSL3 2073 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 USH2AO75445 5202 aa3.08□□□□□ -1.92
CPSF6-206ENST00000550987 IGHV1-18A0A0C4DH31 117 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 DHRS12A0PJE2 317 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 IRGMA1A4Y4 181 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 UBE2L6O14933 153 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 MRPL33O75394 65 aaKnown RBP3.07□□□□□ -1.92
CPSF6-206ENST00000550987 AKAIN1P0CW23 69 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 NDUFA6P56556 154 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 FOXF1Q12946 379 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 MSMO1Q15800 293 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 VMA21Q3ZAQ7 101 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 SPANXN3Q5MJ09 141 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 AMMECR1LQ6DCA0 310 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 HRCT1Q6UXD1 115 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 COMMD6Q7Z4G1 85 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 PRR15Q8IV56 129 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 C1orf174Q8IYL3 243 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 C10orf126Q8N4M7 172 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-206ENST00000550987 OR51A4Q8NGJ6 313 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 OR10D4PQ8NGN7 298 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 TOMM6Q96B49 74 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 BORCS8Q96FH0 119 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 NKX6-2Q9C056 277 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-206ENST00000550987 WDR61Q9GZS3 305 aaKnown RBP3.07□□□□□ -1.92
CPSF6-206ENST00000550987 DYNLRB1Q9NP97 96 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 CCDC167Q9P0B6 97 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 NAT8Q9UHE5 227 aa3.07□□□□□ -1.92
CPSF6-206ENST00000550987 AMMECR1Q9Y4X0 333 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-206ENST00000550987 IGHV3OR16-8A0A075B7F1 116 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 PNMA8CA0A1B0GUJ8 204 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 SMIM31A0A1B0GVY4 71 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 A0A1B0GW54 56 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 A0A1B0GW64 132 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 LINC00862A6NCI5 91 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 GGT3PA6NGU5 568 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 TMEM212A6NML5 194 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 BBIP1A8MTZ0 92 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 A8MUU9 505 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 A8MWP6 167 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 GGTLC3B5MD39 225 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 M0R381 172 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 CDC42EP2O14613 210 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 NPFFO15130 113 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 CRHBPP24387 322 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 AQP4P55087 323 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 DEFA1P59665 94 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 PABPC1L2AQ5JQF8 200 aa3.06□□□□□ -1.92
CPSF6-206ENST00000550987 BCL2L15Q5TBC7 163 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms