RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 K7ENP7 123 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 NDUFB1O75438 58 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 FXYD5Q96DB9 178 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 F6UB75 175 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 K7ERJ3 54 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 LINC01545Q5VT33 79 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
CLIP1-209ENST00000537178 ETV2O00321 342 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-209ENST00000537178 DKK2Q9UBU2 259 aa8.4□□□□□ -1.06
CLIP1-209ENST00000537178 H0YGX0 51 aa8.4□□□□□ -1.06
CLIP1-209ENST00000537178 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.06
CLIP1-209ENST00000537178 POU2AF1Q16633 256 aa8.4□□□□□ -1.06
CLIP1-209ENST00000537178 THADAQ6YHU6 1953 aa8.4□□□□□ -1.07
CLIP1-209ENST00000537178 MP68P56378 58 aa8.4□□□□□ -1.07
CLIP1-209ENST00000537178 RNASE13Q5GAN3 156 aaKnown RBP8.4□□□□□ -1.07
CLIP1-209ENST00000537178 ZNF491Q8N8L2 437 aa8.4□□□□□ -1.07
CLIP1-209ENST00000537178 ZNF747Q9BV97 191 aa8.4□□□□□ -1.07
CLIP1-209ENST00000537178 BUB3O43684 328 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 DEFB105AQ8NG35 78 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 C1orf147Q96MC9 270 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-209ENST00000537178 TRAV4A0A0B4J268 109 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 CLPSL1A2RUU4 121 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 RS1O15537 224 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 U3KQE9 123 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 PRSS47A8MTI9 375 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 IGFL3Q6UXB1 125 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 DKK4Q9UBT3 224 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 DMDP11532 3685 aa8.39□□□□□ -1.07
CLIP1-209ENST00000537178 NOP10Q9NPE3 64 aaKnown RBP8.38□□□□□ -1.07
CLIP1-209ENST00000537178 C15orf65H3BRN8 121 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 LTAP01374 205 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 PRR20EP86478 221 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 PRR20CP86479 221 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 PRR20DP86480 221 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 PRR20BP86481 221 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 PRR20AP86496 221 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 AGPAT4-IT1Q9H0P7 198 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 RNASE8Q8TDE3 154 aaKnown RBP8.38□□□□□ -1.07
CLIP1-209ENST00000537178 RBAKDNA6NC62 111 aa8.38□□□□□ -1.07
CLIP1-209ENST00000537178 IL15RAQ13261 267 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 PRR30Q53SZ7 412 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-209ENST00000537178 A0A0J9YY99 117 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 DYNAPQ8N1N2 210 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-209ENST00000537178 Q9HAA7 133 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 A0A1B0GX51 115 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 H3BQ85 93 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 C5orf38Q86SI9 138 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 WIPF2Q8TF74 440 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-209ENST00000537178 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 IGHG2P01859 326 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 DUX4L9Q6RFH8 374 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-209ENST00000537178 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
CLIP1-209ENST00000537178 WISP1O95388 367 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 FAM120AOSQ5T036 256 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 WDR86Q86TI4 376 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 LYPD6BQ8NI32 183 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 YPEL4Q96NS1 127 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-209ENST00000537178 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-209ENST00000537178 B5MCH6 92 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 CCL25O15444 150 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 Q6ZVH6 145 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 RNF152Q8N8N0 203 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 ACACBO00763 2458 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 IGLV1-44P01699 117 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
CLIP1-209ENST00000537178 ADAMTS20P59510 1910 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 CACNA1AO00555 2505 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 GNRH2O43555 120 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 SONP18583 2426 aaKnown RBP8.36□□□□□ -1.07
CLIP1-209ENST00000537178 NDUFC2O95298 119 aa8.36□□□□□ -1.07
CLIP1-209ENST00000537178 ADAMTS9Q9P2N4 1935 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 Q6ZQT7 251 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 ZGRF1Q86YA3 2104 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 SND1-IT1Q9HBX3 110 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 ATOX1O00244 68 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 HIST2H2BCQ6DN03 193 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 C8orf31Q8N9H6 132 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 WFDC9Q8NEX5 89 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 DYSFO75923 2080 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 NREPQ16612 68 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
CLIP1-209ENST00000537178 FREM2Q5SZK8 3169 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 J3QKU1 62 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
CLIP1-209ENST00000537178 FOXE3Q13461 319 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 DEFB125Q8N687 156 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 CCL18P55774 89 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 TIRAPP58753 221 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 CRIP3Q6Q6R5 217 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 DOPEY1Q5JWR5 2465 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms