RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 GDF5OSQ5U4N7 250 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 LYPD5Q6UWN5 251 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 PLPP5Q8NEB5 264 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 LSM10Q969L4 123 aaKnown RBP1.12□□□□□ -2.23
VBP1-203ENST00000535916 AGPAT4-IT1Q9H0P7 198 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 TMEM14CQ9P0S9 112 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 GNG8Q9UK08 70 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 BOKQ9UMX3 212 aaPredicted RBP1.12□□□□□ -2.23
VBP1-203ENST00000535916 AKAP11Q9UKA4 1901 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 E9PCH4 1651 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 MRC2Q9UBG0 1479 aa1.12□□□□□ -2.23
VBP1-203ENST00000535916 ZNF142P52746 1687 aaPredicted RBP1.11□□□□□ -2.23
VBP1-203ENST00000535916 TRBV6-7A0A0A0MS04 114 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 TRAV17A0A0B4J275 112 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 KLF7O75840 302 aaPredicted RBP1.11□□□□□ -2.23
VBP1-203ENST00000535916 SLC25A6P12236 298 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 IL7P13232 177 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 HIST1H1DP16402 221 aaKnown RBP1.11□□□□□ -2.23
VBP1-203ENST00000535916 Q6AWC8 147 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 OR2T2Q6IF00 324 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 SBSPONQ8IVN8 264 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 LINC00526Q96FQ7 95 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 C12orf57Q99622 126 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 SEC11CQ9BY50 192 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 NAA60Q9H7X0 242 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 NDUFA12Q9UI09 145 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 SERP1Q9Y6X1 66 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 DOCK10Q96BY6 2186 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 PZPP20742 1482 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 PTPRFP10586 1907 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 MYH6P13533 1939 aa1.11□□□□□ -2.23
VBP1-203ENST00000535916 ZFC3H1O60293 1989 aaKnown RBP1.1□□□□□ -2.23
VBP1-203ENST00000535916 HELZ2Q9BYK8 2649 aaKnown RBP1.1□□□□□ -2.23
VBP1-203ENST00000535916 PEAK1Q9H792 1746 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 DAPK1P53355 1430 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 TRBV10-1A0A0K0K1A3 114 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 ATP6V1G2-DDX39BF2Z307 99 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 GYPBP06028 91 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 PIRTP0C851 137 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 AKAIN1P0CW23 69 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 PRB4P10163 310 aaPredicted RBP1.1□□□□□ -2.23
VBP1-203ENST00000535916 IL9P15248 144 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 GNG4P50150 75 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 SPANXN1Q5VSR9 72 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 Q6ZS92 163 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 DEFB132Q7Z7B7 95 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 COPS9Q8WXC6 57 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 DMAC1Q96GE9 116 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 C14orf144Q96I85 54 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 WFDC10AQ9H1F0 79 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 TMEM242Q9NWH2 141 aa1.1□□□□□ -2.23
VBP1-203ENST00000535916 MUC22E2RYF6 1773 aaPredicted RBP1.1□□□□□ -2.23
VBP1-203ENST00000535916 FN1P02751 2386 aaKnown RBP1.1□□□□□ -2.23
VBP1-203ENST00000535916 EML5Q05BV3 1969 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 NDUFB6O95139 128 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 TNFP01375 233 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 IL5P05113 134 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 RPL37AP61513 92 aaKnown RBP1.09□□□□□ -2.23
VBP1-203ENST00000535916 MRPS10P82664 201 aaKnown RBP1.09□□□□□ -2.23
VBP1-203ENST00000535916 SPATA45Q537H7 98 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 SLC48A1Q6P1K1 146 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 UNQ5815/PRO19632Q6UWF5 114 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 SPTSSAQ969W0 71 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 TCEAL7Q9BRU2 100 aa1.09□□□□□ -2.23
VBP1-203ENST00000535916 MRPL35Q9NZE8 188 aaKnown RBP1.09□□□□□ -2.23
VBP1-203ENST00000535916 MRPL36Q9P0J6 103 aaKnown RBP1.09□□□□□ -2.23
VBP1-203ENST00000535916 TRPM7Q96QT4 1865 aa1.09□□□□□ -2.24
VBP1-203ENST00000535916 HEATR5BQ9P2D3 2071 aa1.09□□□□□ -2.24
VBP1-203ENST00000535916 ZFYVE16Q7Z3T8 1539 aa1.09□□□□□ -2.24
VBP1-203ENST00000535916 MYH7P12883 1935 aa1.09□□□□□ -2.24
VBP1-203ENST00000535916 PTPRDP23468 1912 aa1.09□□□□□ -2.24
VBP1-203ENST00000535916 MYH13Q9UKX3 1938 aa1.09□□□□□ -2.24
VBP1-203ENST00000535916 NRKQ7Z2Y5 1582 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 TRAV23DV6A0A075B6W5 121 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 IGKV2-40A0A087WW87 121 aaPredicted RBP1.08□□□□□ -2.24
VBP1-203ENST00000535916 MCRIP1C9JLW8 97 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 IGKV2D-40P01614 121 aaPredicted RBP1.08□□□□□ -2.24
VBP1-203ENST00000535916 IQCJQ1A5X6 159 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 Q56UQ5 140 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 NDUFA11Q86Y39 141 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 TMEM141Q96I45 108 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 ATG5Q9H1Y0 275 aa1.08□□□□□ -2.24
VBP1-203ENST00000535916 SHROOM2Q13796 1616 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 MAPKBP1O60336 1514 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 NBDYA0A0U1RRE5 68 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 TFF1P04155 84 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 SMIM6P0DI80 62 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 Q8N8P6 123 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 KTN1Q86UP2 1357 aaKnown RBP1.07□□□□□ -2.24
VBP1-203ENST00000535916 SDK1Q7Z5N4 2213 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 RREB1Q92766 1687 aa1.07□□□□□ -2.24
VBP1-203ENST00000535916 BLMP54132 1417 aaPredicted RBP1.06□□□□□ -2.24
VBP1-203ENST00000535916 IFT140Q96RY7 1462 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 DLEC1Q9Y238 1755 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 FREM3P0C091 2139 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 SMARCA2P51531 1590 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 C20orf202A1L168 122 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 HIGD1CA8MV81 97 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 SNAPC5O75971 98 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 PIPP12273 146 aaPredicted RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms