RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CDC34P49427 236 aaPredicted RBP12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 Q6ZSA8 131 aa12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 LINC00528Q8N1L1 170 aa12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
SSSCA1-206ENST00000531405 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 SERTM2A0A1B0GWG4 89 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 GAGE1Q13065 139 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 GAGE4Q13068 117 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 GAGE5Q13069 117 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 GAGE13Q4V321 117 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 DAZ4Q86SG3 579 aaKnown RBP12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 DAZ3Q9NR90 486 aaKnown RBP12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 Q9UF83 564 aa12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 LRP1Q07954 4544 aaKnown RBP12.18□□□□□ -0.46
SSSCA1-206ENST00000531405 PLA2G1BP04054 148 aaKnown RBP12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 STAG3L2P0CL84 134 aa12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 STAG3L3P0CL85 134 aa12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 SMUG1Q53HV7 270 aa12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 PTH2Q96A98 100 aa12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 PARLQ9H300 379 aa12.17□□□□□ -0.46
SSSCA1-206ENST00000531405 GGTLC3B5MD39 225 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 K7EQM0 130 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 GCHFRP30047 84 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 FLI1Q01543 452 aaPredicted RBP12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 ZFP69Q49AA0 526 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 RAB24Q969Q5 203 aa12.16□□□□□ -0.46
SSSCA1-206ENST00000531405 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
SSSCA1-206ENST00000531405 SUMO1P63165 101 aaKnown RBP12.15□□□□□ -0.46
SSSCA1-206ENST00000531405 OR2T35Q8NGX2 323 aa12.15□□□□□ -0.46
SSSCA1-206ENST00000531405 SUN5Q8TC36 379 aa12.15□□□□□ -0.46
SSSCA1-206ENST00000531405 BAALCQ8WXS3 180 aa12.15□□□□□ -0.46
SSSCA1-206ENST00000531405 JPT2Q9H910 190 aa12.15□□□□□ -0.46
SSSCA1-206ENST00000531405 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 LGALSLQ3ZCW2 172 aaPredicted RBP12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 C14orf178Q8N769 122 aaPredicted RBP12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 SAMD10Q9BYL1 202 aa12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 EPDR1Q9UM22 224 aa12.14□□□□□ -0.47
SSSCA1-206ENST00000531405 ZFP2Q6ZN57 461 aa12.13□□□□□ -0.47
SSSCA1-206ENST00000531405 OR2G3Q8NGZ4 309 aa12.13□□□□□ -0.47
SSSCA1-206ENST00000531405 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
SSSCA1-206ENST00000531405 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
SSSCA1-206ENST00000531405 TRAV34A0A0B4J273 112 aa12.12□□□□□ -0.47
SSSCA1-206ENST00000531405 A8MWV9 139 aa12.12□□□□□ -0.47
SSSCA1-206ENST00000531405 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
SSSCA1-206ENST00000531405 S100A4P26447 101 aaKnown RBP12.12□□□□□ -0.47
SSSCA1-206ENST00000531405 SCXQ7RTU7 201 aa12.12□□□□□ -0.47
SSSCA1-206ENST00000531405 PKHD1L1Q86WI1 4243 aa12.11□□□□□ -0.47
SSSCA1-206ENST00000531405 ATP6V0CP27449 155 aa12.11□□□□□ -0.47
SSSCA1-206ENST00000531405 UFSP1Q6NVU6 142 aa12.11□□□□□ -0.47
SSSCA1-206ENST00000531405 SH3BGRL3Q9H299 93 aa12.11□□□□□ -0.47
SSSCA1-206ENST00000531405 ASIPP42127 132 aa12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 TOR2AQ5JU69 321 aa12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 TMEM167BQ9NRX6 74 aa12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
SSSCA1-206ENST00000531405 H3BVH4 76 aa12.09□□□□□ -0.47
SSSCA1-206ENST00000531405 CXorf1O96002 111 aa12.09□□□□□ -0.47
SSSCA1-206ENST00000531405 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
SSSCA1-206ENST00000531405 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 A0A087WWC5 75 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 DEFA1P59665 94 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 DEFA3P59666 94 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 PIK3CD-AS1Q5SR53 167 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 URGCP-MRPS24S4R325 110 aa12.08□□□□□ -0.48
SSSCA1-206ENST00000531405 HMCN2Q8NDA2 5059 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 B4DEV8 164 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 MBP02144 154 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 FAM74A4Q5TZK3 123 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 NIT1Q86X76 327 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 IL36BQ9NZH7 164 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
SSSCA1-206ENST00000531405 KRTAP10-4P60372 401 aaPredicted RBP12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 UBE2G2P60604 165 aa12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 SERF2P84101 59 aa12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 Q86TA4 180 aa12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 RMI2Q96E14 147 aa12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 AQP10Q96PS8 301 aa12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 ALG5Q9Y673 324 aa12.06□□□□□ -0.48
SSSCA1-206ENST00000531405 A0A087WWL8 130 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 A0A1W2PRE2 83 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 GRIFINA4D1Z8 144 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 M0R036 132 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 IFNA7P01567 189 aa12.05□□□□□ -0.48
SSSCA1-206ENST00000531405 Q8N976 141 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms