RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TMEM236Q5W0B7 351 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 SPAG11AQ6PDA7 123 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 BPIFA4PQ86YQ2 179 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 TMEM183AQ8IXX5 376 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 DEFB107AQ8IZN7 70 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 ARRDC1Q8N5I2 433 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 PACRGLQ8N7B6 248 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 ZNF738Q8NE65 137 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 BPIFB6Q8NFQ5 453 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 OR10P1Q8NGE3 313 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 OR51S1Q8NGJ8 323 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 OR52I1Q8NGK6 324 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 SETD6Q8TBK2 473 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 CANT1Q8WVQ1 401 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 DEDD2Q8WXF8 326 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 RPUSD4Q96CM3 377 aaKnown RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 SLC35E1Q96K37 410 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 KCNS1Q96KK3 526 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 CARD19Q96LW7 228 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 LINC00052Q96N35 136 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 ZNF2Q9BSG1 426 aaPredicted RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 HDHD3Q9BSH5 251 aaPredicted RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 SRRQ9GZT4 340 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 TMEM222Q9H0R3 208 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 IFT46Q9NQC8 304 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 DAZ3Q9NR90 486 aaKnown RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 CCL28Q9NRJ3 127 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 TMEM14CQ9P0S9 112 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 EXTL2Q9UBQ6 330 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 RSL24D1Q9UHA3 163 aaKnown RBP0.82□□□□□ -2.28
CD44-212ENST00000524922 SSR3Q9UNL2 185 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 GPR132Q9UNW8 380 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 FLVCR2Q9UPI3 526 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 URGCP-MRPS24S4R325 110 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 V9GY05 133 aa0.82□□□□□ -2.28
CD44-212ENST00000524922 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 A0A087WX48 190 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 IGHV3-49A0A0A0MS15 119 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 A0A0B4J2A0 478 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 FAM25EA8MYX2 175 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 F6UB75 175 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 L7N2F9 121 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 SULT1C2O00338 296 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 MYL12BO14950 172 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 NUPR1O60356 82 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 PITX3O75364 302 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 KRASP01116 189 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 IGKV1-39P01597 117 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 IGLV7-43P04211 117 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 IGKV1D-39P04432 117 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 RLN1P04808 185 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 TLX1NBP0CAT3 122 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 IGLC2P0DOY2 106 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 HIST1H1EP10412 219 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 FGF6P10767 208 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 NFYAP23511 347 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 RCVRNP35243 200 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 LPAR6P43657 344 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 UBE2D1P51668 147 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 GTF2A1P52655 376 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 ZNF138P52744 262 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 TAS2R20P59543 309 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 GNG2P59768 71 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 RAB11AP62491 216 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 HIST1H1AQ02539 215 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 SSBP1Q04837 148 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 FGL1Q08830 312 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 PPP1R8Q12972 351 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 MLLT11Q13015 90 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 IQCJQ1A5X6 159 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 ZNF674Q2M3X9 581 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 C2orf76Q3KRA6 126 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 DNLZQ5SXM8 178 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 XAF1Q6GPH4 301 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 LAIR2Q6ISS4 152 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 UFSP1Q6NVU6 142 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 ZFP1Q6P2D0 407 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 KRTAP26-1Q6PEX3 210 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 DAZ4Q86SG3 579 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 LHFPL1Q86WI0 220 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 C12orf45Q8N5I9 185 aaPredicted RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 ZFAND2AQ8N6M9 145 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 SLC25A29Q8N8R3 303 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 TMEM75Q8N9X5 138 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 OR4C5Q8NGB2 326 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 DYNC2LI1Q8TCX1 351 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 C15orf40Q8WUR7 153 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 APH1BQ8WW43 257 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 BAALCQ8WXS3 180 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 AP3S1Q92572 193 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 UFD1Q92890 307 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 ISOC2Q96AB3 205 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 PINX1Q96BK5 328 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 CCDC124Q96CT7 223 aaKnown RBP0.81□□□□□ -2.28
CD44-212ENST00000524922 PFDN5Q99471 154 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 RSG1Q9BU20 258 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 TMEM147Q9BVK8 224 aa0.81□□□□□ -2.28
CD44-212ENST00000524922 MND1Q9BWT6 205 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms