RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 OR10G7Q8NGN6 311 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 OR2G3Q8NGZ4 309 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 PACRGQ96M98 296 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 TP53TG3Q9ULZ0 132 aa7.79□□□□□ -1.16
TRAPPC4-204ENST00000524797 TRAV26-1A0A087WT03 109 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 A0A1B0GVY2 172 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 PGPA6NDG6 321 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 SPINK4O60575 86 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 IBA57Q5T440 356 aaKnown RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 NUDT10Q8NFP7 164 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 GNPNAT1Q96EK6 184 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 PSMG3Q9BT73 122 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 RPH3ALQ9UNE2 315 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 A0A0J9YY99 117 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 RBFOX3A6NFN3 312 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 PRSS29PA6NIE9 313 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 B4DEV8 164 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 HMGB3O15347 200 aaKnown RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 TRGC2P03986 189 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 CXCL1P09341 107 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 CDC34P49427 236 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 CCL18P55774 89 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 PDZD11Q5EBL8 140 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 MRPL52Q86TS9 123 aaKnown RBP7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 FAM213BQ8TBF2 198 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 TVP23CQ96ET8 276 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 C18orf15Q96N68 181 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 LINC00588Q9Y4M8 146 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 LENEPQ9Y5L5 61 aa7.78□□□□□ -1.16
TRAPPC4-204ENST00000524797 MUC4Q99102 2169 aa7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 ZNF727A8MUV8 499 aa7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 TRGC1P0CF51 173 aa7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 FHITP49789 147 aa7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 JOSD1Q15040 202 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 CMTM2Q8TAZ6 248 aa7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
TRAPPC4-204ENST00000524797 FAT2Q9NYQ8 4349 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 TRGV2A0A075B6R0 118 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 TGIF2-C20orf24A0A0A6YYL0 155 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 TMEM238C9JI98 176 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 H3BNG1 76 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 STAG3L2P0CL84 134 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 STAG3L3P0CL85 134 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 ARL14EPLP0DKL9 152 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 ZNF415Q09FC8 603 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 Q6AWC8 147 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 URGCP-MRPS24S4R325 110 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 PHOX2AO14813 284 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 PPBPP02775 128 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 GNG5P63218 68 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 MUC21Q5SSG8 566 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 C1orf134Q5TEV5 83 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 GOLT1AQ6ZVE7 132 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 HIST1H2BLQ99880 126 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 SH3BGRL3Q9H299 93 aa7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 MRPL16Q9NX20 251 aaKnown RBP7.76□□□□□ -1.17
TRAPPC4-204ENST00000524797 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
TRAPPC4-204ENST00000524797 GCHFRP30047 84 aa7.75□□□□□ -1.17
TRAPPC4-204ENST00000524797 SERF2P84101 59 aa7.75□□□□□ -1.17
TRAPPC4-204ENST00000524797 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
TRAPPC4-204ENST00000524797 FRZBQ92765 325 aa7.75□□□□□ -1.17
TRAPPC4-204ENST00000524797 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
TRAPPC4-204ENST00000524797 A0A1B0GV50 99 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 SERTM2A0A1B0GWG4 89 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 GCGP01275 180 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 CEBPGP53567 150 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 TMEM183AQ8IXX5 376 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 TMEM242Q9NWH2 141 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 TRGV11A0A075B6L2 103 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 IGHV3-53P01767 116 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 ESRGQ1W209 222 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 ZNF506Q5JVG8 444 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
TRAPPC4-204ENST00000524797 A0A096LPF7 62 aa7.73□□□□□ -1.17
TRAPPC4-204ENST00000524797 TRAV8-1A0A0A6YYK1 113 aa7.73□□□□□ -1.17
TRAPPC4-204ENST00000524797 XKRY2A2RUG3 117 aa7.73□□□□□ -1.17
TRAPPC4-204ENST00000524797 GZMBP10144 247 aa7.73□□□□□ -1.17
TRAPPC4-204ENST00000524797 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
TRAPPC4-204ENST00000524797 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
TRAPPC4-204ENST00000524797 F6UZH7 168 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 CXorf1O96002 111 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 NPSP0C0P6 89 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 SPXQ9BT56 116 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 TMEM167BQ9NRX6 74 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 NAGKQ9UJ70 344 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 MRPS16Q9Y3D3 137 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 TRBV24-1A0A075B6N3 115 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 TRAV21A0A0B4J279 112 aa7.72□□□□□ -1.17
TRAPPC4-204ENST00000524797 K7EP13 123 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms