RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 FAM30AQ9NZY2 134 aa9.92□□□□□ -0.82
PRKDC-204ENST00000521331 KRBOX1C9JBD0 128 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 RS1O15537 224 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 IGHV3-33P01772 117 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 PQLC2Q6ZP29 291 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 NDFIP1Q9BT67 221 aa9.91□□□□□ -0.82
PRKDC-204ENST00000521331 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
PRKDC-204ENST00000521331 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
PRKDC-204ENST00000521331 PET100P0DJ07 73 aa9.9□□□□□ -0.82
PRKDC-204ENST00000521331 PPP1R1CQ8WVI7 109 aa9.9□□□□□ -0.82
PRKDC-204ENST00000521331 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.82
PRKDC-204ENST00000521331 SH3BGRL3Q9H299 93 aa9.9□□□□□ -0.82
PRKDC-204ENST00000521331 SERTM2A0A1B0GWG4 89 aa9.89□□□□□ -0.83
PRKDC-204ENST00000521331 A0A1W2PPV4 95 aa9.89□□□□□ -0.83
PRKDC-204ENST00000521331 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
PRKDC-204ENST00000521331 ACOT6Q3I5F7 207 aaPredicted RBP9.89□□□□□ -0.83
PRKDC-204ENST00000521331 Q6ZSA8 131 aa9.89□□□□□ -0.83
PRKDC-204ENST00000521331 ATP6V0E2Q8NHE4 81 aa9.89□□□□□ -0.83
PRKDC-204ENST00000521331 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
PRKDC-204ENST00000521331 TAAR5O14804 337 aa9.88□□□□□ -0.83
PRKDC-204ENST00000521331 EIF3GO75821 320 aaKnown RBP eCLIP9.88□□□□□ -0.83
PRKDC-204ENST00000521331 DPPA3Q6W0C5 159 aa9.88□□□□□ -0.83
PRKDC-204ENST00000521331 PTH2Q96A98 100 aa9.88□□□□□ -0.83
PRKDC-204ENST00000521331 TRAV8-3A0A0A6YYJ7 113 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 IGHV3-73A0A0B4J1V6 119 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
PRKDC-204ENST00000521331 RPL12P30050 165 aaKnown RBP9.87□□□□□ -0.83
PRKDC-204ENST00000521331 H2BFSP57053 126 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 GNG5P63218 68 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 TMUB2Q71RG4 321 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 LINC00528Q8N1L1 170 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 DEFB104AQ8WTQ1 72 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 C9orf85Q96MD7 179 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
PRKDC-204ENST00000521331 K7EQM0 130 aa9.86□□□□□ -0.83
PRKDC-204ENST00000521331 WFDC2Q14508 124 aa9.86□□□□□ -0.83
PRKDC-204ENST00000521331 ZNF506Q5JVG8 444 aa9.86□□□□□ -0.83
PRKDC-204ENST00000521331 C11orf21Q9P2W6 132 aa9.86□□□□□ -0.83
PRKDC-204ENST00000521331 RAB2AP61019 212 aa9.85□□□□□ -0.83
PRKDC-204ENST00000521331 ZNF345Q14585 488 aa9.85□□□□□ -0.83
PRKDC-204ENST00000521331 C5orf17Q8NAS9 161 aa9.85□□□□□ -0.83
PRKDC-204ENST00000521331 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
PRKDC-204ENST00000521331 COX11Q9Y6N1 276 aa9.85□□□□□ -0.83
PRKDC-204ENST00000521331 A0A0D9SG52 128 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 PGPEP1LA6NFU8 196 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 GCGP01275 180 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 TCRAP04437 139 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 ZNF80P51504 273 aaPredicted RBP9.84□□□□□ -0.83
PRKDC-204ENST00000521331 ZFP2Q6ZN57 461 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 OR10G9Q8NGN4 311 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 OR10G7Q8NGN6 311 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 PSG8Q9UQ74 426 aa9.84□□□□□ -0.83
PRKDC-204ENST00000521331 A0A087WWC5 75 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 GGTLC3B5MD39 225 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 LECT2O14960 151 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 HMGB3O15347 200 aaKnown RBP9.83□□□□□ -0.84
PRKDC-204ENST00000521331 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 PIK3CD-AS1Q5SR53 167 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 KCNRGQ8N5I3 272 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 WFDC1Q9HC57 220 aa9.83□□□□□ -0.84
PRKDC-204ENST00000521331 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
PRKDC-204ENST00000521331 A8MWV9 139 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 SCO1O75880 301 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
PRKDC-204ENST00000521331 CDC34P49427 236 aaPredicted RBP9.82□□□□□ -0.84
PRKDC-204ENST00000521331 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
PRKDC-204ENST00000521331 Q8N3U1 123 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 RMI2Q96E14 147 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 PARLQ9H300 379 aa9.82□□□□□ -0.84
PRKDC-204ENST00000521331 RNF222A6NCQ9 220 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 SEC11BP0C7V7 166 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 FLI1Q01543 452 aaPredicted RBP9.81□□□□□ -0.84
PRKDC-204ENST00000521331 GAGE1Q13065 139 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 GAGE4Q13068 117 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 GAGE5Q13069 117 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 DAZ4Q86SG3 579 aaKnown RBP9.81□□□□□ -0.84
PRKDC-204ENST00000521331 CYB561D1Q8N8Q1 229 aa9.81□□□□□ -0.84
PRKDC-204ENST00000521331 DAZ3Q9NR90 486 aaKnown RBP9.81□□□□□ -0.84
PRKDC-204ENST00000521331 ARPC5O15511 151 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
PRKDC-204ENST00000521331 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 UQCC3Q6UW78 93 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 SCXQ7RTU7 201 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 Q8N976 141 aa9.8□□□□□ -0.84
PRKDC-204ENST00000521331 OR2G3Q8NGZ4 309 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms