RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NRXN2Q9P2S2 1712 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 C2orf70A6NJV1 201 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 KNCNA6PVL3 124 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 A8MWV9 139 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 OOSP1A8MZH6 123 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 PDCD6O75340 191 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 SCGB1C2P0DMR2 95 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 FKBP2P26885 142 aaKnown RBP2.32□□□□□ -2.04
SKP1-208ENST00000521216 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 NOXRED1Q6NXP6 359 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 AMN1Q8IY45 258 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 NT5CQ8TCD5 201 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 LMX1AQ8TE12 382 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 CHCHD1Q96BP2 118 aaKnown RBP2.32□□□□□ -2.04
SKP1-208ENST00000521216 ABHD14BQ96IU4 210 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 SMIM7Q9BQ49 75 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 AICDAQ9GZX7 198 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 RPUSD1Q9UJJ7 312 aaKnown RBP2.32□□□□□ -2.04
SKP1-208ENST00000521216 LY96Q9Y6Y9 160 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 ARL2-SNX15V9GYD0 113 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 SIP14410 1827 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 CPAMD8Q8IZJ3 1885 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 SCN8AQ9UQD0 1980 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 PRR14LQ5THK1 2151 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 TRGV5A0A0B4J1U4 118 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 PIGBOS1A0A0B4J2F0 54 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 A0A0J9YW62 118 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 RBAKDNA6NC62 111 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 IGLL5B9A064 214 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 H3BT86 120 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 J3QRE1 110 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 OR1I1O60431 355 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 CPSF4O95639 269 aaKnown RBP2.31□□□□□ -2.04
SKP1-208ENST00000521216 IGKCP01834 107 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 COX6A1P12074 109 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 CSN1S1P47710 185 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 INSL3P51460 131 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 ATP5EP56381 51 aaPredicted RBP2.31□□□□□ -2.04
SKP1-208ENST00000521216 DAD1P61803 113 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 NPC2P61916 151 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 SERF2P84101 59 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 ZNF117Q03924 483 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 LGALS9BQ3B8N2 356 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 NCBP2-AS2Q69YL0 99 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 CLEC19AQ6UXS0 136 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 PRNTQ86SH4 94 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 TRAPPC6BQ86SZ2 158 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 LINC00311Q8N616 119 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 ZNF563Q8TA94 476 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 TSKUQ8WUA8 353 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 IGF2BP2-AS1Q96M15 143 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 METTL26Q96S19 204 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 NMNAT3Q96T66 252 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 FAM103A1Q9BTL3 118 aaKnown RBP2.31□□□□□ -2.04
SKP1-208ENST00000521216 OTORQ9NRC9 128 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 ITGB4P16144 1822 aa2.31□□□□□ -2.04
SKP1-208ENST00000521216 TRAV2A0A0B4J234 112 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 TRAV8-2A0A0B4J237 113 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 MDFIC2A0A1B0GVS7 189 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 GRIFINA4D1Z8 144 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
SKP1-208ENST00000521216 HCRTO43612 131 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 CD7P09564 240 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 CTLA4P16410 223 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 RPL30P62888 115 aaKnown RBP2.3□□□□□ -2.04
SKP1-208ENST00000521216 FKBP1AP62942 108 aaKnown RBP2.3□□□□□ -2.04
SKP1-208ENST00000521216 CCL8P80075 99 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 LINC00305Q7Z4B0 112 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 LY6G5BQ8NDX9 201 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 H1FXQ92522 213 aaKnown RBP2.3□□□□□ -2.04
SKP1-208ENST00000521216 GPX7Q96SL4 187 aaPredicted RBP2.3□□□□□ -2.04
SKP1-208ENST00000521216 PRSS27Q9BQR3 290 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 C16orf95Q9H693 158 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 IL36BQ9NZH7 164 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 PCTPQ9UKL6 214 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 AMMECR1Q9Y4X0 333 aaPredicted RBP2.3□□□□□ -2.04
SKP1-208ENST00000521216 NLRC5Q86WI3 1866 aa2.3□□□□□ -2.04
SKP1-208ENST00000521216 FANCMQ8IYD8 2048 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 TRAV17A0A0B4J275 112 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 A6NIN4 97 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 NDUFB3O43676 98 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 CXCL8P10145 99 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 PEBP1P30086 187 aaKnown RBP2.29□□□□□ -2.04
SKP1-208ENST00000521216 UBE2L3P68036 154 aaKnown RBP2.29□□□□□ -2.04
SKP1-208ENST00000521216 CCL20P78556 96 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 TMEM170BQ5T4T1 132 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 EBLN2Q6P2I7 272 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 DGAT2L6Q6ZPD8 337 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 C6orf201Q7Z4U5 140 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 BRK1Q8WUW1 75 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 SPACA5Q96QH8 159 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 TRGV9Q99603 122 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 DPH3P1Q9H4G8 78 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 GNG13Q9P2W3 67 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
SKP1-208ENST00000521216 UBE2L5PA0A1B0GUS4 154 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms