RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 HIST1H2BLQ99880 126 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 TIMM9Q9Y5J7 89 aa6.59□□□□□ -1.35
HDAC3-215ENST00000519474 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.35
HDAC3-215ENST00000519474 J3QR89 54 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 PAGE4O60829 102 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ZNF324O75467 553 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-215ENST00000519474 P0DMU3 169 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 FAM231AP0DMU4 169 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 FAM231CP0DMU5 169 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ADCYAP1P18509 176 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 CAMPP49913 170 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 PDE6HQ13956 83 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ICAM4Q14773 271 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 GFI1BQ5VTD9 330 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 KCNIP4Q6PIL6 250 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ALKAL2Q6UX46 152 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ZNF493Q6ZR52 646 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 C9orf47Q6ZRZ4 202 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 TMEM183AQ8IXX5 376 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 FER1L6-AS1Q8NA97 138 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 OR13C6PQ8NH95 151 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 FXYD5Q96DB9 178 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ODF3Q96PU9 254 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ATP5SQ99766 215 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 SMIM3Q9BZL3 60 aa6.58□□□□□ -1.36
HDAC3-215ENST00000519474 NOP10Q9NPE3 64 aaKnown RBP6.58□□□□□ -1.36
HDAC3-215ENST00000519474 TIMM8BQ9Y5J9 83 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-215ENST00000519474 ALMS1Q8TCU4 4167 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 A0A087WX48 190 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 TRAV12-3A0A0B4J271 114 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 C17orf112F2Z3M2 114 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 FABP4P15090 132 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 LEPP41159 167 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 GNG4P50150 75 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 TMEM97Q5BJF2 176 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 FFAR4Q5NUL3 377 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 OR10G4Q8NGN3 311 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 SCGB1C1Q8TD33 95 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 C16orf74Q96GX8 76 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 VGLL1Q99990 258 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 PAXXQ9BUH6 204 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 TNFSF18Q9UNG2 199 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 FUT9Q9Y231 359 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 V9GYY9 64 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
HDAC3-215ENST00000519474 A0A0D9SG52 128 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 KLLNB2CW77 178 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 SLC25A5P05141 298 aaKnown RBP6.56□□□□□ -1.36
HDAC3-215ENST00000519474 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
HDAC3-215ENST00000519474 Q6ZQT7 251 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 LINC00612Q8N6U2 182 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 OR2T35Q8NGX2 323 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 TMEM263Q8WUH6 116 aaKnown RBP6.56□□□□□ -1.36
HDAC3-215ENST00000519474 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 MRPL32Q9BYC8 188 aaKnown RBP6.56□□□□□ -1.36
HDAC3-215ENST00000519474 AAMDCQ9H7C9 122 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 ZNF492Q9P255 531 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
HDAC3-215ENST00000519474 MRPS16Q9Y3D3 137 aaKnown RBP6.56□□□□□ -1.36
HDAC3-215ENST00000519474 IGKV2-40A0A087WW87 121 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-215ENST00000519474 M0R2N4 97 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 HSBP1O75506 76 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 IGKV2D-40P01614 121 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-215ENST00000519474 ATP5G1P05496 136 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 CRISP2P16562 243 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
HDAC3-215ENST00000519474 ATP5G3P48201 142 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 SULT1A2P50226 295 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
HDAC3-215ENST00000519474 FAM162BQ5T6X4 162 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 NEGR1Q7Z3B1 354 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 LYPD1Q8N2G4 141 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 ZFAND2AQ8N6M9 145 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 TMEM18Q96B42 140 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
HDAC3-215ENST00000519474 C7orf71A4D174 169 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 GPX1P07203 203 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HSD52Q0P140 79 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 DAZ2Q13117 558 aaKnown RBP6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 LGALS9BQ3B8N2 356 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-215ENST00000519474 Q6ZR54 194 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 GTF2H5Q6ZYL4 71 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 C15orf53Q8NAA6 179 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms