RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IGHV3-11P01762 117 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 MT-ND6P03923 174 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 CSN3P07498 182 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 LINC00869P0C866 280 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 GCHFRP30047 84 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 OPRK1P41145 380 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 AMTP48728 403 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 CMC4P56277 68 aaPredicted RBP2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 KRTDAPP60985 99 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 RPL37AP61513 92 aaKnown RBP2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 KRTAP19-6Q3LI70 58 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 OR10J3Q5JRS4 329 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 EBLN2Q6P2I7 272 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 Q6ZN92 141 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 S100A7AQ86SG5 101 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 OR8I2Q8N0Y5 310 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 OR10P1Q8NGE3 313 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 OR2D3Q8NGH3 330 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 C18orf32Q8TCD1 76 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 LINC01600Q96MT4 127 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 TXNDC17Q9BRA2 123 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 SEPSECSQ9HD40 501 aaKnown RBP2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 DAZ1Q9NQZ3 744 aaKnown RBP2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 OSTCQ9NRP0 149 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 ARL2-SNX15V9GYD0 113 aa2.19□□□□□ -2.06
SCARNA13-201ENST00000516672 TRAV9-2A0A087WT02 112 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 TRAV2A0A0B4J234 112 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 TRAV34A0A0B4J273 112 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 OR2T8A6NH00 312 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SNURFLB1AK76 121 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 GGTLC3B5MD39 225 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 C17orf112F2Z3M2 114 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 DEFB4AO15263 64 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 MPDU1O75352 247 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 CXorf1O96002 111 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 IGKV1-17P01599 117 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 HLA-DQA1P01909 254 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 NBEAP1P0C6P0 100 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 IGLC1P0CG04 106 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 DNAH10OSP0CZ25 163 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 APELAP0DMC3 54 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 PSG1P11464 419 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 PMCHP20382 165 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 CRYBB3P26998 211 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 HLA-DMBP28068 263 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SRIP30626 198 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 GPR183P32249 361 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 HINT1P49773 126 aaPredicted RBP2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SYNJ2BPP57105 145 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 UBE2G1P62253 170 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SUMO1P63165 101 aaKnown RBP2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 ZNF90Q03938 601 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SLAQ13239 276 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 RAB31Q13636 194 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 PRR4Q16378 134 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 DEFB114Q30KQ6 69 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 KIAA1644Q3SXP7 199 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 Q56UQ5 140 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 OCIAD2Q56VL3 154 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SPINK9Q5DT21 86 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 CENPWQ5EE01 88 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 BVES-AS1Q5T3Y7 98 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SAMD13Q5VXD3 122 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 MIC13Q5XKP0 118 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 UFSP1Q6NVU6 142 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 WDR73Q6P4I2 378 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 CLEC19AQ6UXS0 136 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 C19orf35Q6ZS72 473 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 LINC00173Q6ZV60 143 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 C2orf91Q6ZV80 131 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 BAGE3Q86Y29 109 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 BAGE2Q86Y30 109 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 ATOH7Q8N100 152 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 FAM19A2Q8N3H0 131 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 THAP8Q8NA92 274 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 ZNF738Q8NE65 137 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 TMEM190Q8WZ59 177 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 TRGV9Q99603 122 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SPAG8Q99932 426 aaPredicted RBP2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SAMD10Q9BYL1 202 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 KRTAP1-5Q9BYS1 174 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 CST9LQ9H4G1 147 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 NPVFQ9HCQ7 196 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 SMPXQ9UHP9 88 aa2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 CHTOPQ9Y3Y2 248 aaKnown RBP2.18□□□□□ -2.06
SCARNA13-201ENST00000516672 DEFB131BA0A096LNP1 70 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 TRAV8-6A0A0B4J262 113 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 MUC21A0A0G2JKD1 596 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 IGHV7-4-1A0A0J9YVY3 117 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 MUC21A0A140T8X8 626 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 TMEM213A2RRL7 107 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 HELTA6NFD8 242 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 OR4C46A6NHA9 309 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 TMEM238C9JI98 176 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 ISLRO14498 428 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 CHEK1O14757 476 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 CRXO43186 299 aaPredicted RBP2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 TRBV12-3P01733 135 aa2.17□□□□□ -2.06
SCARNA13-201ENST00000516672 FGF6P10767 208 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms