RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 AMN1Q8IY45 258 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 OR5AS1Q8N127 324 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 S100A16Q96FQ6 103 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 CYSTM1Q9H1C7 97 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 TNFRSF19Q9NS68 423 aa4.29□□□□□ -1.72
TRAPPC11-209ENST00000512476 BDP1A6H8Y1 2624 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 A0A1W2PNU3 283 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 RBM3P98179 157 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 SIGLECL1Q8N7X8 197 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 RMI2Q96E14 147 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 PMCHL2Q9BQD1 86 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 U3KQK5 164 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 A0A1B0GWA3 101 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 A8MWL6 223 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 INSP01308 110 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 ADCYAP1P18509 176 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 NFYAP23511 347 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 RPL27AP46776 148 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 UBE2AP49459 152 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 Q6ZQT7 251 aa4.28□□□□□ -1.72
TRAPPC11-209ENST00000512476 NCOR1O75376 2440 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 A0A087WXM4 84 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 A0A1W2PQD3 144 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 TMEM223A0PJW6 202 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 CREBL2O60519 120 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 C12orf73Q69YU5 71 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 SLC50A1Q9BRV3 221 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 GTF3C1Q12789 2109 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGHV3-66A0A0C4DH42 116 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 FAM24AA6NFZ4 105 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 NUPR1O60356 82 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 CNEP1R1Q8N9A8 125 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 KLHL30-AS1Q8NEE0 82 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 DEFB124Q8NES8 71 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 PFN4Q8NHR9 129 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 RHOXF1Q8NHV9 184 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 IMMP1LQ96LU5 166 aa4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 ASCC3Q8N3C0 2202 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-209ENST00000512476 NINQ8N4C6 2090 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 F8W1H4 67 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 RPL28P46779 137 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF117Q03924 483 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 NTM-AS1Q6ZSK4 140 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 Q8N377 158 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 C1orf64Q8NEQ6 169 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 AQP3Q92482 292 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 TMEM242Q9NWH2 141 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 GPR179Q6PRD1 2367 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 LECT2O14960 151 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 HYPMO75409 117 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF816Q0VGE8 651 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 Q8IYB0 196 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF525Q8N782 197 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 Q8N976 141 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 AQP10Q96PS8 301 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 UPK3BQ9BT76 320 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 SPANXDQ9BXN6 97 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 DEFB126Q9BYW3 111 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 OR5V1Q9UGF6 321 aa4.26□□□□□ -1.73
TRAPPC11-209ENST00000512476 PCNX2A6NKB5 2137 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 SEC16AO15027 2179 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGHV3-21A0A0B4J1V1 117 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 LY6HO94772 140 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGLC2P0DOY2 106 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGLC3P0DOY3 106 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 FXYD6P3P58550 94 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 SNRPGP62308 76 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF431Q8TF32 576 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 VPS13AQ96RL7 3174 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 WDFY4Q6ZS81 3184 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 TTC28Q96AY4 2481 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 IGKV1D-42A0A075B6H8 117 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 LOC107984156A0A0G2JMH3 177 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 SIX6O95475 246 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 FAUP35544 74 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF791Q3KP31 576 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 XAF1Q6GPH4 301 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 SH2D6Q7Z4S9 175 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ARL17AQ8IVW1 177 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF563Q8TA94 476 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 RAB37Q96AX2 223 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 SDF2L1Q9HCN8 221 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 ZNF222Q9UK12 451 aa4.25□□□□□ -1.73
TRAPPC11-209ENST00000512476 MYO15AQ9UKN7 3530 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 EXPH5Q8NEV8 1989 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 DMDP11532 3685 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 SBSPONQ8IVN8 264 aa4.24□□□□□ -1.73
TRAPPC11-209ENST00000512476 FAM216BQ8N7L0 139 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms