RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	RPP21	Q9H633	154 aa	Known RBP	10.27	□□□□□ -0.77
MATR3-238	ENST00000512107		V9GYV3	84 aa		10.27	□□□□□ -0.77
MATR3-238	ENST00000512107	SNAI2	O43623	268 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	GATC	O43716	136 aa	Known RBP	10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	CXCL1	P09341	107 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	HOXA5	P20719	270 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	DAD1	P61803	113 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	PLEC	Q15149	4684 aa	Known RBP	10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	C10orf91	Q5T1B1	145 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	OR10AG1	Q8NH19	301 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	DAZAP1	Q96EP5	407 aa	Known RBP	10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.26	□□□□□ -0.77
MATR3-238	ENST00000512107	IL36B	Q9NZH7	164 aa		10.26	□□□□□ -0.77
MATR3-238	ENST00000512107		M0R2P5	195 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	IGHV3-53	P01767	116 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	ERVFC1-1	P60608	527 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	RASL10A	Q92737	203 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	SFRP2	Q96HF1	295 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	SPX	Q9BT56	116 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	SAMD10	Q9BYL1	202 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	OSTC	Q9NRP0	149 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	MSRB1	Q9NZV6	116 aa		10.25	□□□□□ -0.77
MATR3-238	ENST00000512107	RYR3	Q15413	4870 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107		F8W036	122 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	HTN3	P15516	51 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	S100A4	P26447	101 aa	Known RBP	10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	SST	P61278	116 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	MUC7	Q8TAX7	377 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	ZNF479	Q96JC4	524 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	BIN3	Q9NQY0	253 aa		10.24	□□□□□ -0.77
MATR3-238	ENST00000512107	NXPH4	O95158	308 aa		10.23	□□□□□ -0.77
MATR3-238	ENST00000512107	LGALS9B	Q3B8N2	356 aa		10.23	□□□□□ -0.77
MATR3-238	ENST00000512107	LYZL1	Q6UWQ5	148 aa		10.23	□□□□□ -0.77
MATR3-238	ENST00000512107	OR10G8	Q8NGN5	311 aa		10.23	□□□□□ -0.77
MATR3-238	ENST00000512107		M0R381	172 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	RS1	O15537	224 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	OR5AL1	P0C617	328 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	MED14OS	P0DP75	135 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	RNF212	Q495C1	297 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	ZNF876P	Q49A33	203 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	UFSP1	Q6NVU6	142 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107		Q6ZSN1	163 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	FER1L6-AS1	Q8NA97	138 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	PTH2	Q96A98	100 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	TPPP3	Q9BW30	176 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	SEC11C	Q9BY50	192 aa		10.22	□□□□□ -0.77
MATR3-238	ENST00000512107	DEFB131B	A0A096LNP1	70 aa		10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	IGHV3-73	A0A0B4J1V6	119 aa		10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	CTRL	P40313	264 aa		10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	RPS20	P60866	119 aa	Known RBP	10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	FHL2	Q14192	279 aa		10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	CFAP126	Q5VTH2	177 aa		10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	C18orf15	Q96N68	181 aa		10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.21	□□□□□ -0.77
MATR3-238	ENST00000512107	TRGV2	A0A075B6R0	118 aa		10.2	□□□□□ -0.78
MATR3-238	ENST00000512107	FOXA3	P55318	350 aa	Predicted RBP	10.2	□□□□□ -0.78
MATR3-238	ENST00000512107	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.2	□□□□□ -0.78
MATR3-238	ENST00000512107	PGLYRP4	Q96LB8	373 aa		10.2	□□□□□ -0.78
MATR3-238	ENST00000512107		Q9UF83	564 aa		10.2	□□□□□ -0.78
MATR3-238	ENST00000512107	TRAV10	A0A0B4J240	114 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	TEX48	A0A1B0GUV7	120 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107		F5H768	121 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	CRYGD	P07320	174 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	CT83	Q5H943	113 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	TSKU	Q8WUA8	353 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	VSIG2	Q96IQ7	327 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	PHLDA3	Q9Y5J5	127 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107	KIF25-AS1	Q9Y6Z4	181 aa		10.19	□□□□□ -0.78
MATR3-238	ENST00000512107		A0A087WWL8	130 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107	TRAV4	A0A0B4J268	109 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107		A8MWL6	223 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107	ATP5G1	P05496	136 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107	LINC00315	P59091	139 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107	CASC10	Q5T4H9	136 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107	TMEM88	Q6PEY1	159 aa		10.18	□□□□□ -0.78
MATR3-238	ENST00000512107	IGHV4-4	A0A075B6R2	117 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107		A0A0J9YY99	117 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	LOC100131303	A0A0U1RQF7	123 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	SMIM27	A0A1W2PRY6	76 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	PNRC1	Q12796	327 aa	Predicted RBP	10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	ATRAID	Q6UW56	229 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	ZFP82	Q8N141	532 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	C15orf54	Q8N8G6	183 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	NUP35	Q8NFH5	326 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	OR4C5	Q8NGB2	326 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	CNFN	Q9BYD5	112 aa		10.17	□□□□□ -0.78
MATR3-238	ENST00000512107	HIGD1C	A8MV81	97 aa		10.16	□□□□□ -0.78
MATR3-238	ENST00000512107	NTF3	P20783	257 aa		10.16	□□□□□ -0.78
MATR3-238	ENST00000512107	C14orf178	Q8N769	122 aa	Predicted RBP	10.16	□□□□□ -0.78
MATR3-238	ENST00000512107	CLRN3	Q8NCR9	226 aa		10.16	□□□□□ -0.78
MATR3-238	ENST00000512107	APLN	Q9ULZ1	77 aa		10.16	□□□□□ -0.78
MATR3-238	ENST00000512107	DNAH1	Q9P2D7	4330 aa		10.15	□□□□□ -0.78
MATR3-238	ENST00000512107	TRAV26-1	A0A087WT03	109 aa		10.15	□□□□□ -0.78
MATR3-238	ENST00000512107		A0A1W2PPQ1	181 aa		10.15	□□□□□ -0.78
MATR3-238	ENST00000512107	XKRY2	A2RUG3	117 aa		10.15	□□□□□ -0.78
MATR3-238	ENST00000512107	IGLL5	B9A064	214 aa		10.15	□□□□□ -0.78
MATR3-238	ENST00000512107	GATA1	P15976	413 aa	Predicted RBP	10.15	□□□□□ -0.78
MATR3-238	ENST00000512107	FAM3B	P58499	235 aa	Predicted RBP	10.15	□□□□□ -0.78
MATR3-238	ENST00000512107	PIK3CD-AS1	Q5SR53	167 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms