RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TCEAL4Q96EI5 215 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 OR4C12Q96R67 309 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 TAF9BQ9HBM6 251 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 MED9Q9NWA0 146 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 ARAP2Q8WZ64 1704 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 EP300Q09472 2414 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 TRANK1O15050 2925 aa1.7□□□□□ -2.14
TRAPPC13-208ENST00000505553 CEP250Q9BV73 2442 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 CFAP54Q96N23 3096 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 B4DSR2 109 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 MRPS14O60783 128 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 PAEPP09466 180 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 PSPHP78330 225 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 SMIM21Q3B7S5 101 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 NAA38Q9BRA0 125 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 CALML5Q9NZT1 146 aa1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 CHCHD2Q9Y6H1 151 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 GCN1Q92616 2671 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-208ENST00000505553 TECTAO75443 2155 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 BRWD1Q9NSI6 2320 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 SAA1P0DJI8 122 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 CXCL8P10145 99 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 RNASE3P12724 160 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 PCOTHQ58A44 107 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF833PQ6ZTB9 187 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 OR5AS1Q8N127 324 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 CCL4L1Q8NHW4 92 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF625Q96I27 306 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 AP1S3Q96PC3 154 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 REG4Q9BYZ8 158 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 COPZ2Q9P299 210 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 KLK9Q9UKQ9 250 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 EML6Q6ZMW3 1958 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 DSPPQ9NZW4 1301 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 USP34Q70CQ2 3546 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 ASH1LQ9NR48 2969 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 SCN8AQ9UQD0 1980 aa1.68□□□□□ -2.14
TRAPPC13-208ENST00000505553 USP9XQ93008 2570 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 TRBV6-8A0A0A6YYG3 113 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 CCDC160A6NGH7 325 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 LOC730098B7Z3J9 87 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 UQCRQO14949 82 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 TRACP01848 142 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 FOXA3P55318 350 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 Q5XG85 94 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 TMEM14EPQ6UXP3 125 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 Q8N2B8 174 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 OR5AK2Q8NH90 309 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF563Q8TA94 476 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 GGACTQ9BVM4 153 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 CEP295Q9C0D2 2601 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 FAM107BQ9H098 131 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 NIT2Q9NQR4 276 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 PAIP2BQ9ULR5 123 aaKnown RBP1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 COL5A1P20908 1838 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 DOCK1Q14185 1865 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 ANAPC1Q9H1A4 1944 aa1.67□□□□□ -2.14
TRAPPC13-208ENST00000505553 LOC285556D6RIA3 1793 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 A0A1B0GW64 132 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 LOC107986453A0A1B0GWG9 222 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF736B4DX44 427 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 CD2P06729 351 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 CNBPP62633 177 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 HSD17B12Q53GQ0 312 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 HAGHLQ6PII5 290 aaPredicted RBP1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 TEX261Q6UWH6 196 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 OR4S1Q8NGB4 309 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 PFDN5Q99471 154 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 U3KQ87 197 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 PLXNB2O15031 1838 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 SPEF2Q9C093 1822 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 ZNF462Q96JM2 2506 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 GBF1Q92538 1859 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 MDC1Q14676 2089 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 C5orf42Q9H799 3197 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 XIRP2A4UGR9 3374 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 CFAP47Q6ZTR5 3102 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 MYO18BQ8IUG5 2567 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 PHIPQ8WWQ0 1821 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 DOCK2Q92608 1830 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 HELZ2Q9BYK8 2649 aaKnown RBP1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 HBDP02042 147 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 MT-ND4LP03901 98 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 MPC1LP0DKB6 136 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 COX4I1P13073 169 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 EVI2AP22794 236 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 CCDC58Q4VC31 144 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 FAM74A1Q5RGS3 127 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 TMEM244Q5VVB8 128 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 GLIPR1L1Q6UWM5 242 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 CLEC2BQ92478 149 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 CST11Q9H112 138 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 ORMDL1Q9P0S3 153 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 SNURFQ9Y675 71 aa1.66□□□□□ -2.14
TRAPPC13-208ENST00000505553 IGF2RP11717 2491 aa1.65□□□□□ -2.14
TRAPPC13-208ENST00000505553 CHD9Q3L8U1 2897 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms