RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
TCOF1-207ENST00000504761 MRPL16Q9NX20 251 aaKnown RBP10.81□□□□□ -0.68
TCOF1-207ENST00000504761 LINC00469Q8N7U9 141 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 DSCAML1Q8TD84 2053 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 GAGE1Q13065 139 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 GAGE4Q13068 117 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 GAGE5Q13069 117 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 GAGE13Q4V321 117 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 FOXI2Q6ZQN5 318 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 RAI1Q7Z5J4 1906 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-207ENST00000504761 IGF1P05019 195 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 LYRM7Q5U5X0 104 aa10.8□□□□□ -0.68
TCOF1-207ENST00000504761 LBHQ53QV2 105 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-207ENST00000504761 LRRC75A-AS1Q8N1F1 130 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 PRADC1Q9BSG0 188 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 IGHV1-24A0A0C4DH33 117 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 IGHG4P01861 327 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 FABP2P12104 132 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 C2orf66Q6UXQ4 117 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 ADARB2-AS1A8MUL3 147 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 AZU1P20160 251 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 Q6YL49 198 aa10.79□□□□□ -0.68
TCOF1-207ENST00000504761 DLX4Q92988 240 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-207ENST00000504761 ZNF815PA8K554 130 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 ZNF48Q96MX3 618 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-207ENST00000504761 AKAP13Q12802 2813 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 A0A087WX48 190 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 TRAV13-1A0A0B4J241 112 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 RBAKDNA6NC62 111 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 Q8N6K4 173 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
TCOF1-207ENST00000504761 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 FRYLO94915 3013 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 H3BRM9 83 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 SNCGO76070 127 aa10.78□□□□□ -0.68
TCOF1-207ENST00000504761 CDPF1Q6NVV7 123 aa10.77□□□□□ -0.68
TCOF1-207ENST00000504761 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.68
TCOF1-207ENST00000504761 POLR3KQ9Y2Y1 108 aaPredicted RBP10.77□□□□□ -0.68
TCOF1-207ENST00000504761 A0A087X0K7 114 aa10.77□□□□□ -0.69
TCOF1-207ENST00000504761 NDUFS6O75380 124 aaKnown RBP10.77□□□□□ -0.69
TCOF1-207ENST00000504761 RPL13AP40429 203 aaKnown RBP10.77□□□□□ -0.69
TCOF1-207ENST00000504761 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
TCOF1-207ENST00000504761 INAFM1C9JVW0 142 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 ZNF80P51504 273 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-207ENST00000504761 SPAG8Q99932 426 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-207ENST00000504761 LENEPQ9Y5L5 61 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 K7EMT4 169 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 IGLV2-8P01709 118 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 FOSL1P15407 271 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 TRPT1Q86TN4 253 aaKnown RBP10.76□□□□□ -0.69
TCOF1-207ENST00000504761 SMIM13P0DJ93 91 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 NAA38Q9BRA0 125 aaKnown RBP10.76□□□□□ -0.69
TCOF1-207ENST00000504761 OR13C6PQ8NH95 151 aa10.76□□□□□ -0.69
TCOF1-207ENST00000504761 PLA2G2AP14555 144 aa10.75□□□□□ -0.69
TCOF1-207ENST00000504761 Q8N8P6 123 aa10.75□□□□□ -0.69
TCOF1-207ENST00000504761 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
TCOF1-207ENST00000504761 SMIM2Q9BVW6 85 aa10.75□□□□□ -0.69
TCOF1-207ENST00000504761 NOP10Q9NPE3 64 aaKnown RBP10.75□□□□□ -0.69
TCOF1-207ENST00000504761 REV3LO60673 3130 aa10.75□□□□□ -0.69
TCOF1-207ENST00000504761 A0A096LPF7 62 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 TRAV2A0A0B4J234 112 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 SPXQ9BT56 116 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
TCOF1-207ENST00000504761 A8MWV9 139 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 F5H768 121 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 MPV17L2Q567V2 206 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 Q6ZSV7 163 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
TCOF1-207ENST00000504761 ZFAND3Q9H8U3 227 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 U3KQE9 123 aa10.74□□□□□ -0.69
TCOF1-207ENST00000504761 RHODO00212 210 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 SMR3AQ99954 134 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 NPC2P61916 151 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 Q8N1Y9 231 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 H3BUT2 72 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 COX6CP09669 75 aa10.73□□□□□ -0.69
TCOF1-207ENST00000504761 CLPSL1A2RUU4 121 aa10.72□□□□□ -0.69
TCOF1-207ENST00000504761 RNASE13Q5GAN3 156 aaKnown RBP10.72□□□□□ -0.69
TCOF1-207ENST00000504761 MAJINQ3KP22 176 aa10.72□□□□□ -0.69
TCOF1-207ENST00000504761 LINC00173Q6ZV60 143 aa10.72□□□□□ -0.69
TCOF1-207ENST00000504761 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
TCOF1-207ENST00000504761 F8P00451 2351 aa10.72□□□□□ -0.69
TCOF1-207ENST00000504761 C19orf71A6NCJ1 209 aa10.72□□□□□ -0.69
TCOF1-207ENST00000504761 MALP21145 153 aa10.72□□□□□ -0.69
TCOF1-207ENST00000504761 CFAP46Q8IYW2 2715 aa10.71□□□□□ -0.69
TCOF1-207ENST00000504761 FREM2Q5SZK8 3169 aa10.71□□□□□ -0.69
TCOF1-207ENST00000504761 LINC01559Q495D7 138 aa10.71□□□□□ -0.69
TCOF1-207ENST00000504761 SMAD5-AS1Q9Y6J3 95 aa10.71□□□□□ -0.69
TCOF1-207ENST00000504761 DAD1P61803 113 aa10.71□□□□□ -0.69
TCOF1-207ENST00000504761 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
TCOF1-207ENST00000504761 JPT2Q9H910 190 aa10.71□□□□□ -0.7
TCOF1-207ENST00000504761 TMEM89A2RUT3 159 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 C4orf3Q8WVX3 66 aa10.7□□□□□ -0.7
TCOF1-207ENST00000504761 MRPL35Q9NZE8 188 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms