RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LINC00476Q8WZB0 136 aa13.62□□□□□ -0.23
HDAC4-212ENST00000495497 ZNF479Q96JC4 524 aa13.62□□□□□ -0.23
HDAC4-212ENST00000495497 TRAV26-1A0A087WT03 109 aa13.61□□□□□ -0.23
HDAC4-212ENST00000495497 DNLZQ5SXM8 178 aa13.61□□□□□ -0.23
HDAC4-212ENST00000495497 OCC1Q8TAD7 63 aa13.61□□□□□ -0.23
HDAC4-212ENST00000495497 SMIM12Q96EX1 92 aa13.61□□□□□ -0.23
HDAC4-212ENST00000495497 C19orf71A6NCJ1 209 aa13.6□□□□□ -0.23
HDAC4-212ENST00000495497 C9JQL5 133 aa13.6□□□□□ -0.23
HDAC4-212ENST00000495497 K7EN84 100 aa13.6□□□□□ -0.23
HDAC4-212ENST00000495497 NUDT3O95989 172 aa13.6□□□□□ -0.23
HDAC4-212ENST00000495497 FHL2Q14192 279 aa13.6□□□□□ -0.23
HDAC4-212ENST00000495497 DAZAP1Q96EP5 407 aaKnown RBP13.6□□□□□ -0.23
HDAC4-212ENST00000495497 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
HDAC4-212ENST00000495497 TRAV4A0A0B4J268 109 aa13.59□□□□□ -0.23
HDAC4-212ENST00000495497 OR4C5Q8NGB2 326 aa13.59□□□□□ -0.23
HDAC4-212ENST00000495497 GZMBP10144 247 aa13.58□□□□□ -0.24
HDAC4-212ENST00000495497 RAB14P61106 215 aa13.58□□□□□ -0.24
HDAC4-212ENST00000495497 VSIG2Q96IQ7 327 aa13.58□□□□□ -0.24
HDAC4-212ENST00000495497 KMT2AQ03164 3969 aa13.58□□□□□ -0.24
HDAC4-212ENST00000495497 MUC4Q99102 2169 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 TRGV4A0A0C4DH28 118 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 RS1O15537 224 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 NDUFS6O75380 124 aaKnown RBP13.57□□□□□ -0.24
HDAC4-212ENST00000495497 CFAP126Q5VTH2 177 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 DMRTA1Q5VZB9 504 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 LGALS9CQ6DKI2 356 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 NUDT10Q8NFP7 164 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 OR2D3Q8NGH3 330 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 PTH2Q96A98 100 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 NUDT11Q96G61 164 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 SMIM7Q9BQ49 75 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 JPT2Q9H910 190 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 SCRT2Q9NQ03 307 aa13.57□□□□□ -0.24
HDAC4-212ENST00000495497 IGHV3-73A0A0B4J1V6 119 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 MUC21A0A0G2JKD1 596 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 MUC21A0A140T8X8 626 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 P01737 135 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 PEA15Q15121 130 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 RNASE7Q9H1E1 156 aaKnown RBP13.56□□□□□ -0.24
HDAC4-212ENST00000495497 HHLA3Q9XRX5 114 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
HDAC4-212ENST00000495497 DNAH6Q9C0G6 4158 aa13.55□□□□□ -0.24
HDAC4-212ENST00000495497 ZNF727A8MUV8 499 aa13.55□□□□□ -0.24
HDAC4-212ENST00000495497 BIN3Q9NQY0 253 aa13.55□□□□□ -0.24
HDAC4-212ENST00000495497 M0R381 172 aa13.54□□□□□ -0.24
HDAC4-212ENST00000495497 PAX4O43316 350 aa13.54□□□□□ -0.24
HDAC4-212ENST00000495497 CXCL1P09341 107 aa13.54□□□□□ -0.24
HDAC4-212ENST00000495497 CRYBA4P53673 196 aa13.54□□□□□ -0.24
HDAC4-212ENST00000495497 PRO0255Q9UI72 69 aa13.54□□□□□ -0.24
HDAC4-212ENST00000495497 SSTP61278 116 aa13.53□□□□□ -0.24
HDAC4-212ENST00000495497 CLLU1Q5K131 121 aa13.53□□□□□ -0.24
HDAC4-212ENST00000495497 SYT8Q8NBV8 401 aa13.53□□□□□ -0.24
HDAC4-212ENST00000495497 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
HDAC4-212ENST00000495497 SAMD10Q9BYL1 202 aa13.53□□□□□ -0.24
HDAC4-212ENST00000495497 SNAI2O43623 268 aa13.52□□□□□ -0.25
HDAC4-212ENST00000495497 P0DMU3 169 aa13.52□□□□□ -0.25
HDAC4-212ENST00000495497 FAM231AP0DMU4 169 aa13.52□□□□□ -0.25
HDAC4-212ENST00000495497 FAM231CP0DMU5 169 aa13.52□□□□□ -0.25
HDAC4-212ENST00000495497 MED14OSP0DP75 135 aa13.52□□□□□ -0.25
HDAC4-212ENST00000495497 SSBP4Q9BWG4 385 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-212ENST00000495497 LY96Q9Y6Y9 160 aa13.52□□□□□ -0.25
HDAC4-212ENST00000495497 H3BNG1 76 aa13.51□□□□□ -0.25
HDAC4-212ENST00000495497 RPS20P60866 119 aaKnown RBP13.51□□□□□ -0.25
HDAC4-212ENST00000495497 SLAQ13239 276 aa13.51□□□□□ -0.25
HDAC4-212ENST00000495497 LINC01551Q86U37 167 aa13.51□□□□□ -0.25
HDAC4-212ENST00000495497 ZFP82Q8N141 532 aa13.51□□□□□ -0.25
HDAC4-212ENST00000495497 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
HDAC4-212ENST00000495497 A0A096LPF7 62 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 LOC100131303A0A0U1RQF7 123 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 A8MWV9 139 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 OR5AL1P0C617 328 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-212ENST00000495497 PIK3CD-AS1Q5SR53 167 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 UBE2DNLQ8IWF7 75 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 SFRP2Q96HF1 295 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
HDAC4-212ENST00000495497 RPP21Q9H633 154 aaKnown RBP13.5□□□□□ -0.25
HDAC4-212ENST00000495497 A0A087WWL8 130 aa13.49□□□□□ -0.25
HDAC4-212ENST00000495497 GATCO43716 136 aaKnown RBP13.49□□□□□ -0.25
HDAC4-212ENST00000495497 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
HDAC4-212ENST00000495497 FAM74A3Q4VXF1 159 aa13.49□□□□□ -0.25
HDAC4-212ENST00000495497 UFSP1Q6NVU6 142 aa13.49□□□□□ -0.25
HDAC4-212ENST00000495497 Q6ZSN1 163 aa13.49□□□□□ -0.25
HDAC4-212ENST00000495497 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
HDAC4-212ENST00000495497 GYPEP15421 78 aa13.48□□□□□ -0.25
HDAC4-212ENST00000495497 ERVFC1-1P60608 527 aa13.48□□□□□ -0.25
HDAC4-212ENST00000495497 FAM74A4Q5TZK3 123 aa13.48□□□□□ -0.25
HDAC4-212ENST00000495497 SPANXN1Q5VSR9 72 aa13.48□□□□□ -0.25
HDAC4-212ENST00000495497 FAM231DQ6ZW35 169 aa13.48□□□□□ -0.25
HDAC4-212ENST00000495497 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
HDAC4-212ENST00000495497 XKRY2A2RUG3 117 aa13.47□□□□□ -0.25
HDAC4-212ENST00000495497 K7EQD1 137 aa13.47□□□□□ -0.25
HDAC4-212ENST00000495497 NXPH4O95158 308 aa13.47□□□□□ -0.25
HDAC4-212ENST00000495497 CRYGDP07320 174 aa13.47□□□□□ -0.25
HDAC4-212ENST00000495497 RPL23P62829 140 aaKnown RBP13.47□□□□□ -0.25
HDAC4-212ENST00000495497 SOHLH1Q5JUK2 328 aa13.47□□□□□ -0.25
HDAC4-212ENST00000495497 LYZL1Q6UWQ5 148 aa13.47□□□□□ -0.25
HDAC4-212ENST00000495497 SLC25A29Q8N8R3 303 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms