RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
BRAT1-206ENST00000493232 BLCAPP62952 87 aa12.69□□□□□ -0.38
BRAT1-206ENST00000493232 K7EMT4 169 aa12.69□□□□□ -0.38
BRAT1-206ENST00000493232 GYPEP15421 78 aa12.69□□□□□ -0.38
BRAT1-206ENST00000493232 Q8N9W7 124 aa12.69□□□□□ -0.38
BRAT1-206ENST00000493232 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 CFC1P0CG37 223 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 ASPHD1Q5U4P2 390 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 K7EP13 123 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 IFITM1P13164 125 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 Q9HAA7 133 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 HELZP42694 1942 aaKnown RBP12.68□□□□□ -0.38
BRAT1-206ENST00000493232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■■□ 20.1
BRAT1-206ENST00000493232 MALRD1Q5VYJ5 2156 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 BUB3O43684 328 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 NOTCH3Q9UM47 2321 aa12.68□□□□□ -0.38
BRAT1-206ENST00000493232 ORMDL1Q9P0S3 153 aa12.67□□□□□ -0.38
BRAT1-206ENST00000493232 MYLKQ15746 1914 aa12.67□□□□□ -0.38
BRAT1-206ENST00000493232 CAMK2N2Q96S95 79 aa12.66□□□□□ -0.38
BRAT1-206ENST00000493232 MYCNOSP40205 109 aa12.66□□□□□ -0.38
BRAT1-206ENST00000493232 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
BRAT1-206ENST00000493232 C5orf38Q86SI9 138 aa12.66□□□□□ -0.38
BRAT1-206ENST00000493232 TRAV4A0A0B4J268 109 aa12.65□□□□□ -0.38
BRAT1-206ENST00000493232 K7ERJ3 54 aa12.65□□□□□ -0.38
BRAT1-206ENST00000493232 hADV29S1A0JD25 119 aa12.65□□□□□ -0.38
BRAT1-206ENST00000493232 COX7A2LO14548 114 aa12.65□□□□□ -0.38
BRAT1-206ENST00000493232 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
BRAT1-206ENST00000493232 NUP210Q8TEM1 1887 aaPredicted RBP12.65□□□□□ -0.39
BRAT1-206ENST00000493232 WI2-2373I1.2A0A1W2PRP0 233 aa12.65□□□□□ -0.39
BRAT1-206ENST00000493232 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 A0A087WW49 117 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 TINCRA0A1B0GVN0 87 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 RITA1Q96K30 269 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 RPL18AQ02543 176 aaKnown RBP12.64□□□□□ -0.39
BRAT1-206ENST00000493232 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 GPHB5Q86YW7 130 aa12.64□□□□□ -0.39
BRAT1-206ENST00000493232 ANKRD29Q8N6D5 301 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 RPL39LQ96EH5 51 aaKnown RBP12.63□□□□□ -0.39
BRAT1-206ENST00000493232 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 H3BMG7 143 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-206ENST00000493232 MED14OSP0DP75 135 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 DOCK11Q5JSL3 2073 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 PRB1P04280 392 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 C9orf47Q6ZRZ4 202 aa12.63□□□□□ -0.39
BRAT1-206ENST00000493232 TRAV12-1A0A0B4J245 112 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 Q6ZVH6 145 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 IGLV1-47P01700 117 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 ZNF503Q96F45 646 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 CITED1Q99966 193 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 GTF3C1Q12789 2109 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 H0YGX0 51 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 BAALC-AS2P0C853 105 aa12.62□□□□□ -0.39
BRAT1-206ENST00000493232 NTN5Q8WTR8 489 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-206ENST00000493232 FUSP35637 526 aaKnown RBP eCLIP12.61□□□□□ -0.39
BRAT1-206ENST00000493232 TIRAPP58753 221 aa12.61□□□□□ -0.39
BRAT1-206ENST00000493232 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
BRAT1-206ENST00000493232 MRPL36Q9P0J6 103 aaKnown RBP12.61□□□□□ -0.39
BRAT1-206ENST00000493232 PCNX1Q96RV3 2341 aa12.61□□□□□ -0.39
BRAT1-206ENST00000493232 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
BRAT1-206ENST00000493232 IGHG2P01859 326 aa12.61□□□□□ -0.39
BRAT1-206ENST00000493232 SPRY4Q9C004 299 aa12.61□□□□□ -0.39
BRAT1-206ENST00000493232 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
BRAT1-206ENST00000493232 H3BQ85 93 aa12.6□□□□□ -0.39
BRAT1-206ENST00000493232 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
BRAT1-206ENST00000493232 SPRY2O43597 315 aa12.6□□□□□ -0.39
BRAT1-206ENST00000493232 COA6Q5JTJ3 125 aaKnown RBP12.6□□□□□ -0.39
BRAT1-206ENST00000493232 Q8N7P7 452 aa12.6□□□□□ -0.39
BRAT1-206ENST00000493232 DEFB105AQ8NG35 78 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 SND1-IT1Q9HBX3 110 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 CLPSL1A2RUU4 121 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 IGHV3-30P01768 117 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 IGHV3-33P01772 117 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 ACYP1P07311 99 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 IGHV3-30-3P0DP02 117 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 IGHV3-30-5P0DP03 117 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 HIST2H2BCQ6DN03 193 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 LYPD6Q86Y78 171 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 PCP2Q8IVA1 136 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 Q8N1Y9 231 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 PLXND1Q9Y4D7 1925 aa12.59□□□□□ -0.39
BRAT1-206ENST00000493232 A0A0J9YXV3 536 aa12.58□□□□□ -0.39
BRAT1-206ENST00000493232 TRACP01848 142 aa12.58□□□□□ -0.39
BRAT1-206ENST00000493232 ZFP36P26651 326 aaKnown RBP12.58□□□□□ -0.39
BRAT1-206ENST00000493232 FAM167A-AS1Q96KT0 104 aa12.58□□□□□ -0.39
BRAT1-206ENST00000493232 SIRPDQ9H106 197 aa12.58□□□□□ -0.39
BRAT1-206ENST00000493232 TRBV7-3A0A075B6L6 115 aa12.58□□□□□ -0.4
BRAT1-206ENST00000493232 NDUFS5O43920 106 aa12.58□□□□□ -0.4
BRAT1-206ENST00000493232 TM2D2Q9BX73 214 aa12.58□□□□□ -0.4
BRAT1-206ENST00000493232 GAGE12HA6NDE8 117 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 MAJINQ3KP22 176 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 C15orf53Q8NAA6 179 aa12.57□□□□□ -0.4
BRAT1-206ENST00000493232 IGLV10-54A0A075B6I4 117 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms