RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 VMO1Q7Z5L0 202 aa8.74□□□□□ -1.01
CRNKL1-204ENST00000490910 ZMAT4Q9H898 229 aa8.74□□□□□ -1.01
CRNKL1-204ENST00000490910 ICOSQ9Y6W8 199 aa8.74□□□□□ -1.01
CRNKL1-204ENST00000490910 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 GATA3P23771 443 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 NEXN-AS1Q8NBZ9 246 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.73□□□□□ -1.015e-7■■□□□ 13.2
CRNKL1-204ENST00000490910 OOSP1A8MZH6 123 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 GAS8-AS1O95177 125 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 DUX5Q96PT3 197 aa8.73□□□□□ -1.01
CRNKL1-204ENST00000490910 C10orf142B7Z368 130 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 PRSS33Q8NF86 280 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 KAAG1Q9UBP8 84 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 SLC25A29Q8N8R3 303 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 LINC01560Q8TB33 94 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 FAM110AQ9BQ89 295 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 LINC00527Q9UJ94 153 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 ZNF672Q499Z4 452 aaPredicted RBP8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 IGLV11-55A0A075B6I3 123 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 RPL39P62891 51 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
CRNKL1-204ENST00000490910 UBE2L6O14933 153 aa8.71□□□□□ -1.01
CRNKL1-204ENST00000490910 FAM110DQ8TAY7 271 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-204ENST00000490910 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-204ENST00000490910 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-204ENST00000490910 CRPP02741 224 aa8.71□□□□□ -1.02
CRNKL1-204ENST00000490910 CTSGP08311 255 aa8.71□□□□□ -1.02
CRNKL1-204ENST00000490910 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
CRNKL1-204ENST00000490910 Q71RC1 249 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-204ENST00000490910 GNRH2O43555 120 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 THBDP07204 575 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 A0A0B4J2C4 111 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 I3L3M4 83 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 LY6EQ16553 131 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 MINOS1Q5TGZ0 78 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 MINOS1-NBL1R4GNA1 71 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 BUB3O43684 328 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
CRNKL1-204ENST00000490910 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 Q6Q795 121 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 TRAV41A0A0B4J266 112 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 ATOX1O00244 68 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 WISP2O76076 250 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 FSTL3O95633 263 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 UBE2D1P51668 147 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 PRIMA1Q86XR5 153 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 CLEC2BQ92478 149 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RIF1Q5UIP0 2472 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RBMY1BA6NDE4 496 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RBMY1EA6NEQ0 496 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 M0R1W7 72 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RS1O15537 224 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RBMY1DP0C7P1 496 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RASL10AQ92737 203 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 ATP6V0E1O15342 81 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 RHOHQ15669 191 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
CRNKL1-204ENST00000490910 IGHV3OR16-10A0A075B7F0 116 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 LGALS9O00182 355 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 UQCRQO14949 82 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 IGLV1-47P01700 117 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 UBE2D3P61077 147 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 UBE2D2P62837 147 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 RUSC1-AS1Q66K80 236 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 MOB4Q9Y3A3 225 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 MRPS12O15235 138 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 P0DMU3 169 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 FAM231AP0DMU4 169 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 FAM231CP0DMU5 169 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 S100A7L2Q5SY68 101 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 ARHGAP32A7KAX9 2087 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 BAALC-AS2P0C853 105 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 NRACQ8N912 160 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 PRO0461Q9UI25 63 aa8.68□□□□□ -1.02
CRNKL1-204ENST00000490910 G3V318 75 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 HOXB4P17483 251 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 LINC00643Q86TS7 51 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 E7EQL1 145 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 DKK4Q9UBT3 224 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 TNRC6BQ9UPQ9 1833 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 SUMO4Q6EEV6 95 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 RHPN1-AS1Q9BWJ2 59 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 COL4A2P08572 1712 aa8.67□□□□□ -1.02
CRNKL1-204ENST00000490910 DSCAMO60469 2012 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 ATP5G1P05496 136 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 C9orf47Q6ZRZ4 202 aa8.66□□□□□ -1.02
CRNKL1-204ENST00000490910 FANCD2OSQ96PS1 177 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms