RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 EMP1P54849 157 aa9.34□□□□□ -0.91
NR1H3-223ENST00000486991 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
NR1H3-223ENST00000486991 ZNF415Q09FC8 603 aa9.34□□□□□ -0.91
NR1H3-223ENST00000486991 ZNF493Q6ZR52 646 aa9.34□□□□□ -0.91
NR1H3-223ENST00000486991 C16orf74Q96GX8 76 aa9.34□□□□□ -0.91
NR1H3-223ENST00000486991 GSN-AS1Q9NRJ2 163 aa9.34□□□□□ -0.91
NR1H3-223ENST00000486991 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
NR1H3-223ENST00000486991 RYR1P21817 5038 aa9.33□□□□□ -0.92
NR1H3-223ENST00000486991 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
NR1H3-223ENST00000486991 XKRY2A2RUG3 117 aa9.33□□□□□ -0.92
NR1H3-223ENST00000486991 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
NR1H3-223ENST00000486991 MT-ND4LP03901 98 aa9.33□□□□□ -0.92
NR1H3-223ENST00000486991 RNF212Q495C1 297 aa9.33□□□□□ -0.92
NR1H3-223ENST00000486991 RNASE8Q8TDE3 154 aaKnown RBP9.33□□□□□ -0.92
NR1H3-223ENST00000486991 H3BVH4 76 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 PPP1R2P9O14990 202 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 LGALS9CQ6DKI2 356 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 C11orf72Q8NBR9 251 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 CLRN3Q8NCR9 226 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 V9GYV3 84 aa9.32□□□□□ -0.92
NR1H3-223ENST00000486991 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 A8MWL6 223 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 CXCL1P09341 107 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 RNASE3P12724 160 aaKnown RBP9.31□□□□□ -0.92
NR1H3-223ENST00000486991 TCL1AP56279 114 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 CT83Q5H943 113 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 ZNF575Q86XF7 245 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 SVBPQ8N300 66 aa9.31□□□□□ -0.92
NR1H3-223ENST00000486991 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
NR1H3-223ENST00000486991 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 PLAC8L1A1L4L8 177 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 SNAPINO95295 136 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 FER1L6-AS1Q8NA97 138 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 ANAPC16Q96DE5 110 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 IL36BQ9NZH7 164 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 DNAH2Q9P225 4427 aa9.3□□□□□ -0.92
NR1H3-223ENST00000486991 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 C7orf77A4D0Y5 90 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 RHEBQ15382 184 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 TSKUQ8WUA8 353 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 C9orf85Q96MD7 179 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 SPXQ9BT56 116 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 RPS10P5Q9NQ39 176 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 CELA1Q9UNI1 258 aa9.29□□□□□ -0.92
NR1H3-223ENST00000486991 FAT2Q9NYQ8 4349 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 A0A1W2PPQ1 181 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 IGLL5B9A064 214 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 IGLC6P0CF74 106 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 SSTP61278 116 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 DAZ2Q13117 558 aaKnown RBP9.28□□□□□ -0.92
NR1H3-223ENST00000486991 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 CTDSP1Q9GZU7 261 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 MRPL16Q9NX20 251 aaKnown RBP9.28□□□□□ -0.92
NR1H3-223ENST00000486991 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
NR1H3-223ENST00000486991 LYRM9A8MSI8 78 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 M0R2P5 195 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 ATP6V1G1O75348 118 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 SPART-AS1P0CW21 52 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 OR10AG1Q8NH19 301 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
NR1H3-223ENST00000486991 MUC4Q99102 2169 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 FAM231BA6NCW3 169 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 HIGD1CA8MV81 97 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 F2Z2F3 143 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 M0R381 172 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 SNAI2O43623 268 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 SPINK4O60575 86 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 GAGE7O76087 117 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 SPANXN1Q5VSR9 72 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 Q6ZTI0 123 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 SYT8Q8NBV8 401 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 SSBP4Q9BWG4 385 aaPredicted RBP9.26□□□□□ -0.93
NR1H3-223ENST00000486991 DKK2Q9UBU2 259 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 NAT8BQ9UHF3 227 aa9.26□□□□□ -0.93
NR1H3-223ENST00000486991 A0A087WWC5 75 aa9.25□□□□□ -0.93
NR1H3-223ENST00000486991 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
NR1H3-223ENST00000486991 CTRLP40313 264 aa9.25□□□□□ -0.93
NR1H3-223ENST00000486991 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
NR1H3-223ENST00000486991 ATRAIDQ6UW56 229 aa9.25□□□□□ -0.93
NR1H3-223ENST00000486991 Q6ZTC4 211 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms