RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 A0A1W2PRE2 83 aa17.28■□□□□ 0.36
HLA-F-227ENST00000485513 RNASE3P12724 160 aaKnown RBP17.28■□□□□ 0.36
HLA-F-227ENST00000485513 RPL7L1Q6DKI1 246 aaKnown RBP17.28■□□□□ 0.36
HLA-F-227ENST00000485513 PSCAO43653 123 aa17.27■□□□□ 0.36
HLA-F-227ENST00000485513 BORCS7-ASMTA0A0B4J1R7 106 aa17.26■□□□□ 0.35
HLA-F-227ENST00000485513 IBA57-AS1B1ANH7 110 aa17.26■□□□□ 0.35
HLA-F-227ENST00000485513 MGST1P10620 155 aaKnown RBP17.26■□□□□ 0.35
HLA-F-227ENST00000485513 LINC00479Q96M42 142 aa17.26■□□□□ 0.35
HLA-F-227ENST00000485513 TRAV34A0A0B4J273 112 aa17.25■□□□□ 0.35
HLA-F-227ENST00000485513 RNF222A6NCQ9 220 aa17.25■□□□□ 0.35
HLA-F-227ENST00000485513 GCSHP23434 173 aa17.25■□□□□ 0.35
HLA-F-227ENST00000485513 LELP1Q5T871 98 aa17.25■□□□□ 0.35
HLA-F-227ENST00000485513 FXYD6-FXYD2A0A087WZ82 144 aa17.24■□□□□ 0.35
HLA-F-227ENST00000485513 IFNA7P01567 189 aa17.24■□□□□ 0.35
HLA-F-227ENST00000485513 S100A4P26447 101 aaKnown RBP17.24■□□□□ 0.35
HLA-F-227ENST00000485513 ZNF726P1Q15940 193 aa17.24■□□□□ 0.35
HLA-F-227ENST00000485513 ATP6V0E2Q8NHE4 81 aa17.24■□□□□ 0.35
HLA-F-227ENST00000485513 GTSF1LQ9H1H1 148 aa17.24■□□□□ 0.35
HLA-F-227ENST00000485513 ARL2-SNX15V9GYD0 113 aa17.24■□□□□ 0.35
HLA-F-227ENST00000485513 CTXND1A0A1B0GTU2 59 aa17.23■□□□□ 0.35
HLA-F-227ENST00000485513 Q9HAA7 133 aa17.23■□□□□ 0.35
HLA-F-227ENST00000485513 IGKV3D-20A0A0C4DH25 116 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 LRCOL1A6NCL2 159 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 IGHV3-30P01768 117 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 IGHV3-33P01772 117 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 IGHV3-30-3P0DP02 117 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 IGHV3-30-5P0DP03 117 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 UBE2G2P60604 165 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 PARLQ9H300 379 aa17.22■□□□□ 0.35
HLA-F-227ENST00000485513 FABP5P3A8MUU1 101 aa17.21■□□□□ 0.35
HLA-F-227ENST00000485513 A8MWV9 139 aa17.21■□□□□ 0.35
HLA-F-227ENST00000485513 PEX7O00628 323 aa17.21■□□□□ 0.35
HLA-F-227ENST00000485513 ASIPP42127 132 aa17.21■□□□□ 0.35
HLA-F-227ENST00000485513 LGALSLQ3ZCW2 172 aaPredicted RBP17.2■□□□□ 0.34
HLA-F-227ENST00000485513 PIK3CD-AS1Q5SR53 167 aa17.2■□□□□ 0.34
HLA-F-227ENST00000485513 ZFP2Q6ZN57 461 aa17.2■□□□□ 0.34
HLA-F-227ENST00000485513 Q6ZSN1 163 aa17.2■□□□□ 0.34
HLA-F-227ENST00000485513 IGLV5-52A0A0A0MRZ9 124 aa17.19■□□□□ 0.34
HLA-F-227ENST00000485513 AKR1C8PQ5T2L2 129 aa17.19■□□□□ 0.34
HLA-F-227ENST00000485513 Q86TA4 180 aa17.19■□□□□ 0.34
HLA-F-227ENST00000485513 OR2T35Q8NGX2 323 aa17.19■□□□□ 0.34
HLA-F-227ENST00000485513 NTN5Q8WTR8 489 aaPredicted RBP17.19■□□□□ 0.34
HLA-F-227ENST00000485513 FRZBQ92765 325 aa17.19■□□□□ 0.34
HLA-F-227ENST00000485513 NKX6-2Q9C056 277 aaPredicted RBP17.19■□□□□ 0.34
HLA-F-227ENST00000485513 FAM74A7A6NL05 159 aa17.18■□□□□ 0.34
HLA-F-227ENST00000485513 FGF8P55075 233 aaPredicted RBP17.18■□□□□ 0.34
HLA-F-227ENST00000485513 HIST1H2BAQ96A08 127 aa17.18■□□□□ 0.34
HLA-F-227ENST00000485513 GAGE12JA6NER3 117 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 B4DEV8 164 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 GAGE1Q13065 139 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 GAGE4Q13068 117 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 GAGE5Q13069 117 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 GAGE13Q4V321 117 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 Q5VSD8 79 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 IL36BQ9NZH7 164 aa17.17■□□□□ 0.34
HLA-F-227ENST00000485513 INAFM2P0DMQ5 153 aa17.16■□□□□ 0.34
HLA-F-227ENST00000485513 LAGE3Q14657 143 aa17.16■□□□□ 0.34
HLA-F-227ENST00000485513 Q8N814 137 aa17.16■□□□□ 0.34
HLA-F-227ENST00000485513 JPT2Q9H910 190 aa17.16■□□□□ 0.34
HLA-F-227ENST00000485513 H3BVH4 76 aa17.15■□□□□ 0.34
HLA-F-227ENST00000485513 LINC00694P0DN24 101 aa17.15■□□□□ 0.34
HLA-F-227ENST00000485513 FAT1Q14517 4588 aa17.14■□□□□ 0.34
HLA-F-227ENST00000485513 UFSP1Q6NVU6 142 aa17.14■□□□□ 0.33
HLA-F-227ENST00000485513 ZC2HC1AQ96GY0 325 aa17.14■□□□□ 0.33
HLA-F-227ENST00000485513 SAMD10Q9BYL1 202 aa17.14■□□□□ 0.33
HLA-F-227ENST00000485513 KRBOX1C9JBD0 128 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 M0R036 132 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 CRIP1P50238 77 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 DMRTA1Q5VZB9 504 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 Q8N3U1 123 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 SYT8Q8NBV8 401 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 TM2D2Q9BX73 214 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 ZFP30Q9Y2G7 519 aa17.13■□□□□ 0.33
HLA-F-227ENST00000485513 MAP1LC3B2A6NCE7 125 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 SMR3BP02814 79 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-227ENST00000485513 ARMS2P0C7Q2 107 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 DNLZQ5SXM8 178 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 COX8CQ7Z4L0 72 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 C14orf178Q8N769 122 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-227ENST00000485513 TMEM70Q9BUB7 260 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 MAP1LC3BQ9GZQ8 125 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 Q9UF83 564 aa17.12■□□□□ 0.33
HLA-F-227ENST00000485513 G3V3Q6 166 aa17.11■□□□□ 0.33
HLA-F-227ENST00000485513 RHODO00212 210 aa17.11■□□□□ 0.33
HLA-F-227ENST00000485513 SH2D1AO60880 128 aa17.11■□□□□ 0.33
HLA-F-227ENST00000485513 FMC1Q96HJ9 113 aa17.11■□□□□ 0.33
HLA-F-227ENST00000485513 A0A087WWC5 75 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 GRIFINA4D1Z8 144 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 ARPC5O15511 151 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 UBE2G1P62253 170 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 HAMPP81172 84 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 FAM162BQ5T6X4 162 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 OR11H4Q8NGC9 324 aa17.1■□□□□ 0.33
HLA-F-227ENST00000485513 CYTL1Q9NRR1 136 aa17.09■□□□□ 0.33
HLA-F-227ENST00000485513 TRAV8-3A0A0A6YYJ7 113 aa17.08■□□□□ 0.32
HLA-F-227ENST00000485513 FAM74A4Q5TZK3 123 aa17.08■□□□□ 0.32
HLA-F-227ENST00000485513 DAZ4Q86SG3 579 aaKnown RBP17.08■□□□□ 0.32
HLA-F-227ENST00000485513 STOML3Q8TAV4 291 aa17.08■□□□□ 0.32
HLA-F-227ENST00000485513 DAZ3Q9NR90 486 aaKnown RBP17.08■□□□□ 0.32
HLA-F-227ENST00000485513 VPS13BQ7Z7G8 4022 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms