RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ATP5L2Q7Z4Y8 100 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 SMIM29Q86T20 159 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 GPR146Q96CH1 333 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 TMEM70Q9BUB7 260 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 C21orf62Q9NYP8 219 aa4.56□□□□□ -1.68
CLK1-212ENST00000482590 HECTD4Q9Y4D8 3996 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 A0A087X002 238 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 BORCS7-ASMTA0A0B4J1R7 106 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 IGHV3-21A0A0B4J1V1 117 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 MEIS3P1A6NDR6 274 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 KNCNA6PVL3 124 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.55□□□□□ -1.68
CLK1-212ENST00000482590 SNAPC5O75971 98 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 CTSDP07339 412 aaPredicted RBP4.55□□□□□ -1.68
CLK1-212ENST00000482590 PTHLHP12272 177 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 RPS28P62857 69 aaKnown RBP4.55□□□□□ -1.68
CLK1-212ENST00000482590 DAZ2Q13117 558 aaKnown RBP4.55□□□□□ -1.68
CLK1-212ENST00000482590 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 C12orf74Q32Q52 190 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 DAZ4Q86SG3 579 aaKnown RBP4.55□□□□□ -1.68
CLK1-212ENST00000482590 OR5H6Q8NGV6 325 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 ORAOV1Q8WV07 137 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 TMEM147Q9BVK8 224 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 DAZ3Q9NR90 486 aaKnown RBP4.55□□□□□ -1.68
CLK1-212ENST00000482590 PXMP4Q9Y6I8 212 aa4.55□□□□□ -1.68
CLK1-212ENST00000482590 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 IGKV3-7A0A075B6H7 116 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 IGHV3OR16-8A0A075B7F1 116 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 DEDDO75618 318 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 NDUFC2O95298 119 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 IFNA4P05014 189 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 SDC2P34741 201 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 CMC4P56277 68 aaPredicted RBP4.54□□□□□ -1.68
CLK1-212ENST00000482590 WT1-ASQ06250 92 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 IBA57Q5T440 356 aaKnown RBP4.54□□□□□ -1.68
CLK1-212ENST00000482590 LGALS9CQ6DKI2 356 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 ZNF773Q6PK81 442 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 FA2HQ7L5A8 372 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 RPP25LQ8N5L8 163 aaKnown RBP4.54□□□□□ -1.68
CLK1-212ENST00000482590 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 OR5H2Q8NGV7 314 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 C7orf33Q8WU49 177 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 PLEKHB2Q96CS7 222 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 C18orf15Q96N68 181 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 ANAPC13Q9BS18 74 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 FXYD6Q9H0Q3 95 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 Q9H521 79 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
CLK1-212ENST00000482590 IGHV7-4-1A0A0J9YVY3 117 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 A0A1B0GX51 115 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 ZNF705GA8MUZ8 300 aaPredicted RBP4.53□□□□□ -1.68
CLK1-212ENST00000482590 K7EIM0 57 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 GNG7O60262 68 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 COX7A2P2O60397 106 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 KRASP01116 189 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 G6PCP35575 357 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 LPAR6P43657 344 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 PSMB3P49720 205 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 TMEM69Q5SWH9 247 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 TMEM75Q8N9X5 138 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 YPEL4Q96NS1 127 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 GPR82Q96P67 336 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 GGACTQ9BVM4 153 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 RHPN1-AS1Q9BWJ2 59 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 C11orf68Q9H3H3 251 aaKnown RBP4.53□□□□□ -1.68
CLK1-212ENST00000482590 NDUFA4L2Q9NRX3 87 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 FKBP11Q9NYL4 201 aa4.53□□□□□ -1.68
CLK1-212ENST00000482590 IGHV3-49A0A0A0MS15 119 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 TRAV14DV4A0A0A6YYC5 116 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 IGHV3-74A0A0B4J1X5 117 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 KRBOX1C9JBD0 128 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 SOCS3O14543 225 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 PGLYRP1O75594 196 aaPredicted RBP4.52□□□□□ -1.69
CLK1-212ENST00000482590 IGLV2-8P01709 118 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 PMP2P02689 132 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 RPS20P60866 119 aaKnown RBP4.52□□□□□ -1.69
CLK1-212ENST00000482590 FRZBQ92765 325 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 SLC25A46Q96AG3 418 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 S100A16Q96FQ6 103 aaKnown RBP4.52□□□□□ -1.69
CLK1-212ENST00000482590 VSIG2Q96IQ7 327 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 TIMM17AQ99595 171 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 PDCD10Q9BUL8 212 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 ZNF331Q9NQX6 463 aaPredicted RBP4.52□□□□□ -1.69
CLK1-212ENST00000482590 ANAPC10Q9UM13 185 aa4.52□□□□□ -1.69
CLK1-212ENST00000482590 C11orf94C9JXX5 98 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 J3KT08 172 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 IFNA10P01566 189 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 CTSGP08311 255 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 SCGB1C2P0DMR2 95 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 ORM2P19652 201 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 INPP1P49441 399 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 EMP1P54849 157 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 TAS2R20P59543 309 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 HERVK_113P63121 156 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 ERHP84090 104 aaKnown RBP4.51□□□□□ -1.69
CLK1-212ENST00000482590 PRCDQ00LT1 54 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 NEDD8Q15843 81 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 SCGB1C1Q8TD33 95 aa4.51□□□□□ -1.69
CLK1-212ENST00000482590 MBD3L1Q8WWY6 194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms