RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CEMP1Q6PRD7 247 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-206ENST00000476391 CELSR3Q9NYQ7 3312 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 TRAV17A0A0B4J275 112 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 IGIPA6NJ69 53 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 CRYGAP11844 174 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 COX7CP15954 63 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 IGFBPL1Q8WX77 278 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 TMEM141Q96I45 108 aa10.52□□□□□ -0.73
HDAC1-206ENST00000476391 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-206ENST00000476391 CADP27708 2225 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 A0A0G2JNJ9 132 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 DLX6P56179 175 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
HDAC1-206ENST00000476391 RNF5Q99942 180 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 PRO3102Q9H379 93 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 Q9UFV3 132 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 MED13Q9UHV7 2174 aa10.51□□□□□ -0.73
HDAC1-206ENST00000476391 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 M0R1B8 84 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 IGHV1-8P0DP01 117 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 ZNF22P17026 224 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-206ENST00000476391 DLX1P56177 255 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 PRAC2D3DTV9 90 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 C9orf106Q8NAJ2 232 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 TIMM17AQ99595 171 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 AHCTF1Q8WYP5 2266 aa10.5□□□□□ -0.73
HDAC1-206ENST00000476391 A0A0J9YX75 114 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 LEPROTO15243 131 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 NDUFB3O43676 98 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 ZNF876PQ49A33 203 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 ZNF576Q9H609 170 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 ZNF256Q9Y2P7 627 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-206ENST00000476391 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-206ENST00000476391 SDHAF1A6NFY7 115 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 CXCL5P42830 114 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
HDAC1-206ENST00000476391 LST1O00453 97 aa10.48□□□□□ -0.73
HDAC1-206ENST00000476391 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
HDAC1-206ENST00000476391 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
HDAC1-206ENST00000476391 F8W735 103 aaPredicted RBP10.48□□□□□ -0.73
HDAC1-206ENST00000476391 ICE1Q9Y2F5 2266 aa10.48□□□□□ -0.73
HDAC1-206ENST00000476391 MSRB2Q9Y3D2 182 aa10.47□□□□□ -0.73
HDAC1-206ENST00000476391 S4R3C0 116 aa10.47□□□□□ -0.73
HDAC1-206ENST00000476391 IGLV11-55A0A075B6I3 123 aa10.46□□□□□ -0.73
HDAC1-206ENST00000476391 IGLV1-47P01700 117 aa10.46□□□□□ -0.73
HDAC1-206ENST00000476391 PMS2CLQ68D20 193 aa10.46□□□□□ -0.73
HDAC1-206ENST00000476391 ASCL5Q7RTU5 278 aa10.46□□□□□ -0.73
HDAC1-206ENST00000476391 TRIOBPQ9H2D6 2365 aa10.46□□□□□ -0.73
HDAC1-206ENST00000476391 LOXP28300 417 aaPredicted RBP10.46□□□□□ -0.74
HDAC1-206ENST00000476391 SDIM1Q6ZPB5 146 aa10.46□□□□□ -0.74
HDAC1-206ENST00000476391 URB1O60287 2271 aaKnown RBP10.45□□□□□ -0.74
HDAC1-206ENST00000476391 UBE2E1P51965 193 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 C5orf38Q86SI9 138 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 C2orf48Q96LS8 159 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 FANCD2OSQ96PS1 177 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 OVOL1O14753 267 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 PRSS33Q8NF86 280 aa10.45□□□□□ -0.74
HDAC1-206ENST00000476391 MRPL53Q96EL3 112 aaKnown RBP10.45□□□□□ -0.74
HDAC1-206ENST00000476391 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
HDAC1-206ENST00000476391 CCL8P80075 99 aa10.44□□□□□ -0.74
HDAC1-206ENST00000476391 RNF182Q8N6D2 247 aa10.44□□□□□ -0.74
HDAC1-206ENST00000476391 C9orf47Q6ZRZ4 202 aa10.44□□□□□ -0.74
HDAC1-206ENST00000476391 ATOX1O00244 68 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
HDAC1-206ENST00000476391 MGPP08493 103 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 TMEM258P61165 79 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 A0A0J9YXY3 114 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 TRACP01848 142 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
HDAC1-206ENST00000476391 IGHV4OR15-8A0A075B7B6 117 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 A0A087WW49 117 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 F5H768 121 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 TMEM178BH3BS89 294 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 MRAPQ8TCY5 172 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 PLCE1Q9P212 2302 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 CTSGP08311 255 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 ZNF883P0CG24 379 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 MED14OSP0DP75 135 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
HDAC1-206ENST00000476391 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
HDAC1-206ENST00000476391 CFAP47Q6ZTR5 3102 aa10.41□□□□□ -0.74
HDAC1-206ENST00000476391 BUB3O43684 328 aa10.41□□□□□ -0.74
HDAC1-206ENST00000476391 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
HDAC1-206ENST00000476391 DPH3Q96FX2 82 aa10.41□□□□□ -0.74
HDAC1-206ENST00000476391 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
HDAC1-206ENST00000476391 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
HDAC1-206ENST00000476391 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
HDAC1-206ENST00000476391 LENEPQ9Y5L5 61 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms