RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CCDC168Q8NDH2 2452 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 NF1P21359 2839 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 FCER1GP30273 86 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 RAB37Q96AX2 223 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
TVP23B-202ENST00000476139 S100A4P26447 101 aaKnown RBP12.49□□□□□ -0.41
TVP23B-202ENST00000476139 C21orf62-AS1Q17RA5 79 aa12.49□□□□□ -0.41
TVP23B-202ENST00000476139 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
TVP23B-202ENST00000476139 CD5LO43866 347 aa12.49□□□□□ -0.41
TVP23B-202ENST00000476139 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
TVP23B-202ENST00000476139 BOD1L2Q8IYS8 172 aa12.49□□□□□ -0.41
TVP23B-202ENST00000476139 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 GTSCR1Q86UQ5 136 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 CHD6Q8TD26 2715 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 K7EP13 123 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 NRACQ8N912 160 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 NXT2Q9NPJ8 142 aaKnown RBP12.48□□□□□ -0.41
TVP23B-202ENST00000476139 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 A0A087WW49 117 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 HIST2H2BCQ6DN03 193 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
TVP23B-202ENST00000476139 ITPR3Q14573 2671 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 SMIM17P0DL12 118 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 ODF1Q14990 250 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 C18orf65Q6ZTR6 163 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 IGLV2-18A0A075B6J9 118 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 RNF151Q2KHN1 245 aa12.47□□□□□ -0.41
TVP23B-202ENST00000476139 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
TVP23B-202ENST00000476139 K7EMI3 77 aa12.46□□□□□ -0.41
TVP23B-202ENST00000476139 PSMG4Q5JS54 123 aa12.46□□□□□ -0.41
TVP23B-202ENST00000476139 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
TVP23B-202ENST00000476139 RNASE3P12724 160 aaKnown RBP12.46□□□□□ -0.42
TVP23B-202ENST00000476139 ASIPP42127 132 aa12.46□□□□□ -0.42
TVP23B-202ENST00000476139 Q8N8P6 123 aa12.46□□□□□ -0.42
TVP23B-202ENST00000476139 LINC01546A6NGU7 62 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 DEFB136Q30KP8 78 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 KRTAP1-3Q8IUG1 177 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 OR1N2Q8NGR9 330 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 AGRNO00468 2067 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 ID1P41134 155 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
TVP23B-202ENST00000476139 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
TVP23B-202ENST00000476139 TRAV12-3A0A0B4J271 114 aa12.44□□□□□ -0.42
TVP23B-202ENST00000476139 LGALS1P09382 135 aaKnown RBP12.44□□□□□ -0.42
TVP23B-202ENST00000476139 TMEM89A2RUT3 159 aa12.44□□□□□ -0.42
TVP23B-202ENST00000476139 KLLNB2CW77 178 aa12.44□□□□□ -0.42
TVP23B-202ENST00000476139 H3BUT2 72 aa12.44□□□□□ -0.42
TVP23B-202ENST00000476139 ZC2HC1BQ5TFG8 222 aa12.44□□□□□ -0.42
TVP23B-202ENST00000476139 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
TVP23B-202ENST00000476139 MRPL35Q9NZE8 188 aaKnown RBP12.44□□□□□ -0.42
TVP23B-202ENST00000476139 TRAV12-2A0A075B6T6 113 aa12.43□□□□□ -0.42
TVP23B-202ENST00000476139 ADAMTSL5Q6ZMM2 481 aa12.43□□□□□ -0.42
TVP23B-202ENST00000476139 IGKCP01834 107 aa12.43□□□□□ -0.42
TVP23B-202ENST00000476139 MGPP08493 103 aa12.43□□□□□ -0.42
TVP23B-202ENST00000476139 LAGE3Q14657 143 aa12.43□□□□□ -0.42
TVP23B-202ENST00000476139 MUC4Q99102 2169 aa12.43□□□□□ -0.42
TVP23B-202ENST00000476139 ELANEP08246 267 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 MYOZ3Q8TDC0 251 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 DPF1Q92782 380 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 AKAP9Q99996 3911 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 DUX3Q96PT4 197 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 GCSHP23434 173 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 WFDC11Q8NEX6 87 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 CBY1Q9Y3M2 126 aa12.42□□□□□ -0.42
TVP23B-202ENST00000476139 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
TVP23B-202ENST00000476139 RBX1P62877 108 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 SEC11AP67812 179 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 LRRC75A-AS1Q8N1F1 130 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 JPT2Q9H910 190 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 SLURP1P55000 103 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 NEGR1Q7Z3B1 354 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 RASL10AQ92737 203 aa12.41□□□□□ -0.42
TVP23B-202ENST00000476139 K7EQG2 157 aa12.4□□□□□ -0.42
TVP23B-202ENST00000476139 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
TVP23B-202ENST00000476139 SNRPD3P62318 126 aaKnown RBP12.4□□□□□ -0.42
TVP23B-202ENST00000476139 HSD52Q0P140 79 aa12.4□□□□□ -0.42
TVP23B-202ENST00000476139 OR9G4Q8NGQ1 327 aa12.4□□□□□ -0.42
TVP23B-202ENST00000476139 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 DPM2O94777 84 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 CD7P09564 240 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 DPH3P1Q9H4G8 78 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 A0A0J9YX75 114 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 MRAP2Q96G30 205 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 A6NDN8 102 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 CST9LQ9H4G1 147 aa12.39□□□□□ -0.43
TVP23B-202ENST00000476139 K7ERJ3 54 aa12.38□□□□□ -0.43
TVP23B-202ENST00000476139 LGALS9O00182 355 aa12.38□□□□□ -0.43
TVP23B-202ENST00000476139 FXYD2P54710 66 aa12.38□□□□□ -0.43
TVP23B-202ENST00000476139 SPINK13Q1W4C9 94 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms