RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 C1orf100Q5SVJ3 147 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
NPHP3-206ENST00000474871 RNF182Q8N6D2 247 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 FANCD2OSQ96PS1 177 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 WI2-2373I1.2A0A1W2PRP0 233 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 PGPA6NDG6 321 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 H7BZZ5 65 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 SCGB1C2P0DMR2 95 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 CCL28Q9NRJ3 127 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 ZNF492Q9P255 531 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 PHLDA3Q9Y5J5 127 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 TANC2Q9HCD6 1990 aa3.67□□□□□ -1.82
NPHP3-206ENST00000474871 IGLV1-36A0A0B4J1U3 117 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 PRSS1P07477 247 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 NANOS3P60323 173 aaKnown RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 SERF2P84101 59 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 Q6ZPA2 131 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 Q8N8P6 123 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 FXYD5Q96DB9 178 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 MRPL20Q9BYC9 149 aaKnown RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 CTXND1A0A1B0GTU2 59 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 ZNF137PP52743 207 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 CACNG7P62955 275 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 MIC13Q5XKP0 118 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 PHF5AQ7RTV0 110 aaKnown RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 C9orf106Q8NAJ2 232 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 ARL2-SNX15V9GYD0 113 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 DOCK11Q5JSL3 2073 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 TRBV5-7A0A0A0MS05 114 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 TRBV7-1A0A0A6YYK4 115 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 IGHV3-72A0A0B4J1Y9 119 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 A0A0G2JNJ9 132 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 TRBV5-5A0A0J9YX44 114 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 A6NN06 94 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 CXCL5P42830 114 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 ITLN2Q8WWU7 325 aaPredicted RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 C18orf12Q96KH6 178 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 Q9UFV3 132 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 FREM2Q5SZK8 3169 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 SPENQ96T58 3664 aaKnown RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 MED12Q93074 2177 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 IGKV1D-17A0A075B6S4 117 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 KNCNA6PVL3 124 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 ZNF80P51504 273 aaPredicted RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 TWIST1Q15672 202 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 ZNF329Q86UD4 541 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 ZNF843Q8N446 348 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 Q96M66 194 aa3.66□□□□□ -1.82
NPHP3-206ENST00000474871 C11orf68Q9H3H3 251 aaKnown RBP3.66□□□□□ -1.82
NPHP3-206ENST00000474871 AGRNO00468 2067 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 TRAV41A0A0B4J266 112 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 SMIM27A0A1W2PRY6 76 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 RFPL3SP0C7P2 107 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 UBE2D1P51668 147 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 FAM19A3Q7Z5A8 133 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 TMEM252Q8N6L7 170 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 SPANXDQ9BXN6 97 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 ROS1P08922 2347 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 SDK2Q58EX2 2172 aa3.65□□□□□ -1.82
NPHP3-206ENST00000474871 TRGV2A0A075B6R0 118 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 ZNF22P17026 224 aaPredicted RBP3.65□□□□□ -1.83
NPHP3-206ENST00000474871 PIGYQ3MUY2 71 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 SCGB1D4Q6XE38 83 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 ZNF826PQ6ZT77 177 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 RNF5Q99942 180 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 PI4KAP42356 2102 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 IGHV3OR16-10A0A075B7F0 116 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 COX6CP09669 75 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 COX8CQ7Z4L0 72 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 NOTCH3Q9UM47 2321 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 SPG11Q96JI7 2443 aa3.65□□□□□ -1.83
NPHP3-206ENST00000474871 M0R1W7 72 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 PRSS2P07478 247 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 IGHV1-2P23083 117 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 HCP5Q6MZN7 132 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 TMEM167AQ8TBQ9 72 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 SLC50A1Q9BRV3 221 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 MYO7BQ6PIF6 2116 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 WDR87Q6ZQQ6 2873 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 TRAV40A0A0B4J280 105 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 RBMY1BA6NDE4 496 aaKnown RBP3.64□□□□□ -1.83
NPHP3-206ENST00000474871 RBMY1EA6NEQ0 496 aaKnown RBP3.64□□□□□ -1.83
NPHP3-206ENST00000474871 A8MUN3 132 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 CRPP02741 224 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 RBMY1DP0C7P1 496 aaKnown RBP3.64□□□□□ -1.83
NPHP3-206ENST00000474871 RBMY1A1P0DJD3 496 aaKnown RBP3.64□□□□□ -1.83
NPHP3-206ENST00000474871 HTN3P15516 51 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 LAGE3Q14657 143 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 TMEM155Q4W5P6 130 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 Q8N7P7 452 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 ALPK2Q86TB3 2170 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 CADP27708 2225 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 WNK2Q9Y3S1 2297 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 TRAV8-1A0A0A6YYK1 113 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 C11orf94C9JXX5 98 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 IGKV3D-15A0A087WSY6 115 aa3.64□□□□□ -1.83
NPHP3-206ENST00000474871 TRAV2A0A0B4J234 112 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms