RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LCE2BO14633 110 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 PGLYRP1O75594 196 aaPredicted RBP3.79□□□□□ -1.8
HDAC3-206ENST00000471968 NDUFB6O95139 128 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 MT-ND4LP03901 98 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 AKAIN1P0CW23 69 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 GPX4P36969 197 aaPredicted RBP3.79□□□□□ -1.8
HDAC3-206ENST00000471968 SNRPEP62304 92 aaKnown RBP3.79□□□□□ -1.8
HDAC3-206ENST00000471968 BLOC1S1P78537 153 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 SSBP1Q04837 148 aaKnown RBP3.79□□□□□ -1.8
HDAC3-206ENST00000471968 RHOHQ15669 191 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 DHRS11Q6UWP2 260 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 CBLN2Q8IUK8 224 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 KCNRGQ8N5I3 272 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 TMEM229BQ8NBD8 167 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 STOML3Q8TAV4 291 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 RASL10AQ92737 203 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 PFDN5Q99471 154 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 PRRT1Q99946 306 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 C2orf88Q9BSF0 95 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 SSBP4Q9BWG4 385 aaPredicted RBP3.79□□□□□ -1.8
HDAC3-206ENST00000471968 FXYD6Q9H0Q3 95 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 SH3BGRL3Q9H299 93 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 KCNIP3Q9Y2W7 256 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 CBY1Q9Y3M2 126 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 C3orf85A0A1B0GTC6 90 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 ANKRD20A5PA0PJZ0 165 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 ZFP92A6NM28 416 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 COLCA2A8K830 154 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 PRAC2D3DTV9 90 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 MPDU1O75352 247 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 SLC25A5P05141 298 aaKnown RBP3.78□□□□□ -1.8
HDAC3-206ENST00000471968 ADCYAP1P18509 176 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 UCP3P55916 312 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 PIGPP57054 158 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 CYCSP99999 105 aaKnown RBP3.78□□□□□ -1.8
HDAC3-206ENST00000471968 FABP9Q0Z7S8 132 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 BSXQ3C1V8 233 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 KCNIP4Q6PIL6 250 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 OR4D5Q8NGN0 318 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 TERB2Q8NHR7 220 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 MARCH1Q8TCQ1 289 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 MRGPRFQ96AM1 343 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 SAT2Q96F10 170 aaPredicted RBP3.78□□□□□ -1.8
HDAC3-206ENST00000471968 GPR82Q96P67 336 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 MTFP1Q9UDX5 166 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 CACFD1Q9UGQ2 172 aa3.78□□□□□ -1.8
HDAC3-206ENST00000471968 TSTD3H0UI37 97 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 IGLV7-43P04211 117 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 TPT1P13693 172 aaKnown RBP3.77□□□□□ -1.81
HDAC3-206ENST00000471968 AKR1C4P17516 323 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 ANXA7P20073 488 aaKnown RBP3.77□□□□□ -1.81
HDAC3-206ENST00000471968 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
HDAC3-206ENST00000471968 H2BFSP57053 126 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 PKIAP61925 76 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 EIF5AP63241 154 aaKnown RBP3.77□□□□□ -1.81
HDAC3-206ENST00000471968 SRPXP78539 464 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 GUK1Q16774 197 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 ETFRF1Q6IPR1 90 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 ACOT7LQ6ZUV0 252 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 ZFP82Q8N141 532 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 OR13C8Q8NGS7 320 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 RNASEH2CQ8TDP1 164 aaKnown RBP3.77□□□□□ -1.81
HDAC3-206ENST00000471968 GGACTQ9BVM4 153 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 UQCC1Q9NVA1 299 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 ANAPC10Q9UM13 185 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 TNFSF18Q9UNG2 199 aa3.77□□□□□ -1.81
HDAC3-206ENST00000471968 IGKV1D-37A0A075B6S9 117 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 A0A087WWC5 75 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 CEBPZOSA8MTT3 80 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 GOSR2O14653 212 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 HOXB5P09067 269 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 S100A2P29034 98 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 RND3P61587 244 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 RAB31Q13636 194 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 SURF2Q15527 256 aaPredicted RBP3.76□□□□□ -1.81
HDAC3-206ENST00000471968 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 TMEM268Q5VZI3 342 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 PRR27Q6MZM9 219 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 ZNF546Q86UE3 836 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 FAM219AQ8IW50 185 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 OR51S1Q8NGJ8 323 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 HIST1H2BAQ96A08 127 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 C14orf144Q96I85 54 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 ODF3Q96PU9 254 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 ZNF471Q9BX82 626 aaPredicted RBP3.76□□□□□ -1.81
HDAC3-206ENST00000471968 GFRA4Q9GZZ7 299 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 NAA60Q9H7X0 242 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 HEYLQ9NQ87 328 aaPredicted RBP3.76□□□□□ -1.81
HDAC3-206ENST00000471968 FLVCR2Q9UPI3 526 aa3.76□□□□□ -1.81
HDAC3-206ENST00000471968 IGLV10-54A0A075B6I4 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 IGHV3-73A0A0B4J1V6 119 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 A0A1B0GV90 55 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 TRBV6-4A0A1B0GX49 114 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 GAGE12JA6NER3 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
HDAC3-206ENST00000471968 IGKV1-39P01597 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 IGKV1D-39P04432 117 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 RAB5AP20339 215 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 DDTP30046 118 aa3.75□□□□□ -1.81
HDAC3-206ENST00000471968 CAV2P51636 162 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms