RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MED14OSP0DP75 135 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 DAD1P61803 113 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 CT83Q5H943 113 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 Q6ZTI0 123 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 ZNF575Q86XF7 245 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 PHLDA3Q9Y5J5 127 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 V9GYV3 84 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 TGP01266 2768 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 MUC4Q99102 2169 aa7.26□□□□□ -1.25
UPF2-204ENST00000460569 MT-ND4LP03901 98 aa7.25□□□□□ -1.25
UPF2-204ENST00000460569 IGLC6P0CF74 106 aa7.25□□□□□ -1.25
UPF2-204ENST00000460569 NANOS2P60321 138 aaKnown RBP7.25□□□□□ -1.25
UPF2-204ENST00000460569 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
UPF2-204ENST00000460569 RNF212Q495C1 297 aa7.25□□□□□ -1.25
UPF2-204ENST00000460569 TRGV2A0A075B6R0 118 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 MUC21A0A0G2JKD1 596 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 MUC21A0A140T8X8 626 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 A0A1W2PPQ1 181 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 M0R381 172 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 SNAI2O43623 268 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 APOC3P02656 99 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 OR5AL1P0C617 328 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 SSTP61278 116 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 ZNF876PQ49A33 203 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 SPANXN1Q5VSR9 72 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 ZFP82Q8N141 532 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 LINC00612Q8N6U2 182 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 SYT8Q8NBV8 401 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 OR10AG1Q8NH19 301 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 TSKUQ8WUA8 353 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 ANAPC16Q96DE5 110 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 SCRT2Q9NQ03 307 aa7.24□□□□□ -1.25
UPF2-204ENST00000460569 CTRLP40313 264 aa7.23□□□□□ -1.25
UPF2-204ENST00000460569 LYZL1Q6UWQ5 148 aa7.23□□□□□ -1.25
UPF2-204ENST00000460569 Q6ZTC4 211 aa7.23□□□□□ -1.25
UPF2-204ENST00000460569 CLRN3Q8NCR9 226 aa7.23□□□□□ -1.25
UPF2-204ENST00000460569 GTSF1Q8WW33 167 aa7.23□□□□□ -1.25
UPF2-204ENST00000460569 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
UPF2-204ENST00000460569 HIGD1CA8MV81 97 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 F2Z2F3 143 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 NXPH4O95158 308 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 HTN3P15516 51 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 CACNG7P62955 275 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 RHEBQ15382 184 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 DMRTA1Q5VZB9 504 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 SVBPQ8N300 66 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 RASL10AQ92737 203 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 PTH2Q96A98 100 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 BORCS7Q96B45 105 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 PGLYRP4Q96LB8 373 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 WWC2-AS2Q96NR7 200 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 GFRA4Q9GZZ7 299 aa7.22□□□□□ -1.25
UPF2-204ENST00000460569 NACAE9PAV3 2078 aa7.21□□□□□ -1.25
UPF2-204ENST00000460569 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 SNAPINO95295 136 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 ATP5G1P05496 136 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 PIK3CD-AS1Q5SR53 167 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 OR4C5Q8NGB2 326 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 NDUFAF3Q9BU61 184 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 RPS10P5Q9NQ39 176 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 NAT8BQ9UHF3 227 aa7.21□□□□□ -1.26
UPF2-204ENST00000460569 DEFB131BA0A096LNP1 70 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 TRAV4A0A0B4J268 109 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 SMIM27A0A1W2PRY6 76 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 A8MWV9 139 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 FOXA3P55318 350 aaPredicted RBP7.2□□□□□ -1.26
UPF2-204ENST00000460569 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 CNFNQ9BYD5 112 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 CTDSP1Q9GZU7 261 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 JPT2Q9H910 190 aa7.2□□□□□ -1.26
UPF2-204ENST00000460569 A0A087WWC5 75 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 A0A087WWL8 130 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 A0A1B0GUT8 65 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 F5H768 121 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 RS1O15537 224 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 TRGC1P0CF51 173 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 NTF3P20783 257 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 TWIST1Q15672 202 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 FAM74A4Q5TZK3 123 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 WDR73Q6P4I2 378 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 POM121L12Q8N7R1 296 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 PHLDA1Q8WV24 401 aaPredicted RBP7.19□□□□□ -1.26
UPF2-204ENST00000460569 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 MSRB1Q9NZV6 116 aa7.19□□□□□ -1.26
UPF2-204ENST00000460569 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 IGHV3-73A0A0B4J1V6 119 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 TRGV4A0A0C4DH28 118 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 RHODO00212 210 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
UPF2-204ENST00000460569 FAM3BP58499 235 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms